Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC22.24■■□□□ 1.15
PTCH2Q9Y6C5 GOLGA6L3-201ENST00000507199 1679 ntBASIC22.24■■□□□ 1.15
PTCH2Q9Y6C5 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PTCH2Q9Y6C5 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.24■■□□□ 1.15
PTCH2Q9Y6C5 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PTCH2Q9Y6C5 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PTCH2Q9Y6C5 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PTCH2Q9Y6C5 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC22.24■■□□□ 1.15
PTCH2Q9Y6C5 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
PTCH2Q9Y6C5 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC22.24■■□□□ 1.15
PTCH2Q9Y6C5 SDHD-206ENST00000528182 754 ntTSL 3 BASIC22.24■■□□□ 1.15
PTCH2Q9Y6C5 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PTCH2Q9Y6C5 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PTCH2Q9Y6C5 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
PTCH2Q9Y6C5 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PTCH2Q9Y6C5 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.24■■□□□ 1.15
PTCH2Q9Y6C5 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.24■■□□□ 1.15
PTCH2Q9Y6C5 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PTCH2Q9Y6C5 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.24■■□□□ 1.15
PTCH2Q9Y6C5 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PTCH2Q9Y6C5 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PTCH2Q9Y6C5 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
PTCH2Q9Y6C5 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PTCH2Q9Y6C5 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PTCH2Q9Y6C5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.23■■□□□ 1.15
PTCH2Q9Y6C5 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PTCH2Q9Y6C5 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.23■■□□□ 1.15
PTCH2Q9Y6C5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PTCH2Q9Y6C5 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PTCH2Q9Y6C5 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PTCH2Q9Y6C5 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PTCH2Q9Y6C5 AL845331.1-201ENST00000424978 1190 ntBASIC22.23■■□□□ 1.15
PTCH2Q9Y6C5 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC22.23■■□□□ 1.15
PTCH2Q9Y6C5 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC22.23■■□□□ 1.15
PTCH2Q9Y6C5 PRR29-207ENST00000580752 458 ntTSL 3 BASIC22.23■■□□□ 1.15
PTCH2Q9Y6C5 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC22.23■■□□□ 1.15
PTCH2Q9Y6C5 AC006538.3-201ENST00000612495 578 ntBASIC22.23■■□□□ 1.15
PTCH2Q9Y6C5 AC092119.3-201ENST00000612618 583 ntBASIC22.23■■□□□ 1.15
PTCH2Q9Y6C5 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC22.23■■□□□ 1.15
PTCH2Q9Y6C5 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PTCH2Q9Y6C5 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PTCH2Q9Y6C5 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PTCH2Q9Y6C5 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PTCH2Q9Y6C5 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.23■■□□□ 1.15
PTCH2Q9Y6C5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PTCH2Q9Y6C5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
PTCH2Q9Y6C5 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
PTCH2Q9Y6C5 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PTCH2Q9Y6C5 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC22.22■■□□□ 1.15
PTCH2Q9Y6C5 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC22.22■■□□□ 1.15
PTCH2Q9Y6C5 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC22.22■■□□□ 1.15
PTCH2Q9Y6C5 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PTCH2Q9Y6C5 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PTCH2Q9Y6C5 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC22.22■■□□□ 1.15
PTCH2Q9Y6C5 NPAP1P7-201ENST00000613027 823 ntBASIC22.22■■□□□ 1.15
PTCH2Q9Y6C5 AC023511.2-201ENST00000618803 211 ntBASIC22.22■■□□□ 1.15
PTCH2Q9Y6C5 CR769767.2-201ENST00000622735 460 ntBASIC22.22■■□□□ 1.15
PTCH2Q9Y6C5 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PTCH2Q9Y6C5 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC22.22■■□□□ 1.15
PTCH2Q9Y6C5 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
PTCH2Q9Y6C5 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PTCH2Q9Y6C5 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC22.21■■□□□ 1.15
PTCH2Q9Y6C5 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PTCH2Q9Y6C5 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
PTCH2Q9Y6C5 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.21■■□□□ 1.15
PTCH2Q9Y6C5 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC22.21■■□□□ 1.15
PTCH2Q9Y6C5 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PTCH2Q9Y6C5 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PTCH2Q9Y6C5 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PTCH2Q9Y6C5 PRELID1P1-202ENST00000567272 903 ntBASIC22.21■■□□□ 1.15
PTCH2Q9Y6C5 HYMAI.1-201ENST00000620949 238 ntBASIC22.21■■□□□ 1.15
PTCH2Q9Y6C5 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.21■■□□□ 1.15
PTCH2Q9Y6C5 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PTCH2Q9Y6C5 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PTCH2Q9Y6C5 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PTCH2Q9Y6C5 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
PTCH2Q9Y6C5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PTCH2Q9Y6C5 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
PTCH2Q9Y6C5 AC018553.1-201ENST00000616682 1458 ntBASIC22.21■■□□□ 1.15
PTCH2Q9Y6C5 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PTCH2Q9Y6C5 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC22.21■■□□□ 1.15
PTCH2Q9Y6C5 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.2■■□□□ 1.15
PTCH2Q9Y6C5 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
PTCH2Q9Y6C5 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PTCH2Q9Y6C5 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
PTCH2Q9Y6C5 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PTCH2Q9Y6C5 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PTCH2Q9Y6C5 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
PTCH2Q9Y6C5 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC22.2■■□□□ 1.14
PTCH2Q9Y6C5 SKP2-204ENST00000508514 821 ntTSL 3 BASIC22.2■■□□□ 1.14
PTCH2Q9Y6C5 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC22.2■■□□□ 1.14
PTCH2Q9Y6C5 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PTCH2Q9Y6C5 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PTCH2Q9Y6C5 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC22.2■■□□□ 1.14
PTCH2Q9Y6C5 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PTCH2Q9Y6C5 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC22.2■■□□□ 1.14
PTCH2Q9Y6C5 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PTCH2Q9Y6C5 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PTCH2Q9Y6C5 KRT8P10-201ENST00000450021 1447 ntBASIC22.2■■□□□ 1.14
PTCH2Q9Y6C5 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms