Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
RIMBP3Q9UFD9 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
RIMBP3Q9UFD9 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC31.48■■■□□ 2.63
RIMBP3Q9UFD9 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
RIMBP3Q9UFD9 AC073648.2-201ENST00000510116 352 ntBASIC31.48■■■□□ 2.63
RIMBP3Q9UFD9 PMS2P7-201ENST00000506558 1336 ntBASIC31.48■■■□□ 2.63
RIMBP3Q9UFD9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
RIMBP3Q9UFD9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
RIMBP3Q9UFD9 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC31.47■■■□□ 2.63
RIMBP3Q9UFD9 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
RIMBP3Q9UFD9 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
RIMBP3Q9UFD9 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
RIMBP3Q9UFD9 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
RIMBP3Q9UFD9 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC31.47■■■□□ 2.63
RIMBP3Q9UFD9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
RIMBP3Q9UFD9 AC106730.1-201ENST00000566722 1090 ntBASIC31.47■■■□□ 2.63
RIMBP3Q9UFD9 AL353801.3-201ENST00000609898 542 ntBASIC31.47■■■□□ 2.63
RIMBP3Q9UFD9 ABBA01031661.1-201ENST00000634362 1253 ntBASIC31.47■■■□□ 2.63
RIMBP3Q9UFD9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
RIMBP3Q9UFD9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
RIMBP3Q9UFD9 KRT8P20-201ENST00000423953 1409 ntBASIC31.46■■■□□ 2.63
RIMBP3Q9UFD9 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
RIMBP3Q9UFD9 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
RIMBP3Q9UFD9 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC31.46■■■□□ 2.63
RIMBP3Q9UFD9 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC31.46■■■□□ 2.63
RIMBP3Q9UFD9 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
RIMBP3Q9UFD9 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC31.46■■■□□ 2.63
RIMBP3Q9UFD9 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC31.46■■■□□ 2.63
RIMBP3Q9UFD9 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
RIMBP3Q9UFD9 FABP5-202ENST00000396359 986 ntTSL 5 BASIC31.46■■■□□ 2.63
RIMBP3Q9UFD9 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
RIMBP3Q9UFD9 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC31.46■■■□□ 2.63
RIMBP3Q9UFD9 AC138894.3-201ENST00000603787 634 ntBASIC31.46■■■□□ 2.63
RIMBP3Q9UFD9 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC31.46■■■□□ 2.63
RIMBP3Q9UFD9 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
RIMBP3Q9UFD9 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.63
RIMBP3Q9UFD9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC31.45■■■□□ 2.63
RIMBP3Q9UFD9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
RIMBP3Q9UFD9 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC31.45■■■□□ 2.63
RIMBP3Q9UFD9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC31.45■■■□□ 2.63
RIMBP3Q9UFD9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
RIMBP3Q9UFD9 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
RIMBP3Q9UFD9 MIR3197-201ENST00000582241 73 ntBASIC31.45■■■□□ 2.62
RIMBP3Q9UFD9 LINC01711-201ENST00000598340 967 ntBASIC31.45■■■□□ 2.62
RIMBP3Q9UFD9 AL773604.1-201ENST00000617417 272 ntBASIC31.45■■■□□ 2.62
RIMBP3Q9UFD9 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
RIMBP3Q9UFD9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC31.44■■■□□ 2.62
RIMBP3Q9UFD9 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
RIMBP3Q9UFD9 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC31.44■■■□□ 2.62
RIMBP3Q9UFD9 TOB2P1-201ENST00000469761 992 ntBASIC31.44■■■□□ 2.62
RIMBP3Q9UFD9 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
RIMBP3Q9UFD9 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC31.44■■■□□ 2.62
RIMBP3Q9UFD9 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC31.44■■■□□ 2.62
RIMBP3Q9UFD9 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC31.44■■■□□ 2.62
RIMBP3Q9UFD9 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
RIMBP3Q9UFD9 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
RIMBP3Q9UFD9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC31.44■■■□□ 2.62
RIMBP3Q9UFD9 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC31.44■■■□□ 2.62
RIMBP3Q9UFD9 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC31.43■■■□□ 2.62
RIMBP3Q9UFD9 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
RIMBP3Q9UFD9 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
RIMBP3Q9UFD9 URGCP-206ENST00000446958 365 ntTSL 2 BASIC31.43■■■□□ 2.62
RIMBP3Q9UFD9 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC31.43■■■□□ 2.62
RIMBP3Q9UFD9 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC31.43■■■□□ 2.62
RIMBP3Q9UFD9 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
RIMBP3Q9UFD9 TERC-201ENST00000602385 541 ntBASIC31.43■■■□□ 2.62
RIMBP3Q9UFD9 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
RIMBP3Q9UFD9 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
RIMBP3Q9UFD9 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
RIMBP3Q9UFD9 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC31.42■■■□□ 2.62
RIMBP3Q9UFD9 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC31.42■■■□□ 2.62
RIMBP3Q9UFD9 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC31.42■■■□□ 2.62
RIMBP3Q9UFD9 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
RIMBP3Q9UFD9 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
RIMBP3Q9UFD9 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
RIMBP3Q9UFD9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
RIMBP3Q9UFD9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
RIMBP3Q9UFD9 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
RIMBP3Q9UFD9 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
RIMBP3Q9UFD9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC31.42■■■□□ 2.62
RIMBP3Q9UFD9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC31.41■■■□□ 2.62
RIMBP3Q9UFD9 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
RIMBP3Q9UFD9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
RIMBP3Q9UFD9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC31.41■■■□□ 2.62
RIMBP3Q9UFD9 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC31.41■■■□□ 2.62
RIMBP3Q9UFD9 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
RIMBP3Q9UFD9 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC31.41■■■□□ 2.62
RIMBP3Q9UFD9 AP001160.2-201ENST00000596071 487 ntBASIC31.41■■■□□ 2.62
RIMBP3Q9UFD9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
RIMBP3Q9UFD9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC31.4■■■□□ 2.62
RIMBP3Q9UFD9 GOLGA6L3-201ENST00000507199 1679 ntBASIC31.4■■■□□ 2.62
RIMBP3Q9UFD9 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
RIMBP3Q9UFD9 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
RIMBP3Q9UFD9 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
RIMBP3Q9UFD9 SAPCD2P3-201ENST00000455031 850 ntBASIC31.4■■■□□ 2.62
RIMBP3Q9UFD9 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
RIMBP3Q9UFD9 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC31.4■■■□□ 2.62
RIMBP3Q9UFD9 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
RIMBP3Q9UFD9 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
RIMBP3Q9UFD9 AC243591.1-201ENST00000452967 1364 ntBASIC31.39■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms