Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHD8Q9HCK8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CHD8Q9HCK8 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHD8Q9HCK8 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.37■□□□□ 0.53
CHD8Q9HCK8 TSSC2-201ENST00000450217 709 ntBASIC18.37■□□□□ 0.53
CHD8Q9HCK8 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.37■□□□□ 0.53
CHD8Q9HCK8 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.37■□□□□ 0.53
CHD8Q9HCK8 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.37■□□□□ 0.53
CHD8Q9HCK8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHD8Q9HCK8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHD8Q9HCK8 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHD8Q9HCK8 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHD8Q9HCK8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHD8Q9HCK8 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.37■□□□□ 0.53
CHD8Q9HCK8 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.37■□□□□ 0.53
CHD8Q9HCK8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.37■□□□□ 0.53
CHD8Q9HCK8 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.37■□□□□ 0.53
CHD8Q9HCK8 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHD8Q9HCK8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.36■□□□□ 0.53
CHD8Q9HCK8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CHD8Q9HCK8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHD8Q9HCK8 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CHD8Q9HCK8 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHD8Q9HCK8 CA15P1-201ENST00000481698 905 ntBASIC18.36■□□□□ 0.53
CHD8Q9HCK8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
CHD8Q9HCK8 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.36■□□□□ 0.53
CHD8Q9HCK8 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHD8Q9HCK8 AC127496.7-201ENST00000625110 1798 ntBASIC18.36■□□□□ 0.53
CHD8Q9HCK8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.36■□□□□ 0.53
CHD8Q9HCK8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.36■□□□□ 0.53
CHD8Q9HCK8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
CHD8Q9HCK8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHD8Q9HCK8 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHD8Q9HCK8 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CHD8Q9HCK8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CHD8Q9HCK8 HLA-J-203ENST00000494367 1087 ntBASIC18.36■□□□□ 0.53
CHD8Q9HCK8 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.36■□□□□ 0.53
CHD8Q9HCK8 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CHD8Q9HCK8 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.36■□□□□ 0.53
CHD8Q9HCK8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.35■□□□□ 0.53
CHD8Q9HCK8 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.35■□□□□ 0.53
CHD8Q9HCK8 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHD8Q9HCK8 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.35■□□□□ 0.53
CHD8Q9HCK8 FAM99A-202ENST00000538190 1989 ntBASIC18.35■□□□□ 0.53
CHD8Q9HCK8 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHD8Q9HCK8 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHD8Q9HCK8 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CHD8Q9HCK8 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
CHD8Q9HCK8 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHD8Q9HCK8 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.35■□□□□ 0.53
CHD8Q9HCK8 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CHD8Q9HCK8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.35■□□□□ 0.53
CHD8Q9HCK8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CHD8Q9HCK8 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHD8Q9HCK8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.35■□□□□ 0.53
CHD8Q9HCK8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHD8Q9HCK8 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHD8Q9HCK8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHD8Q9HCK8 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHD8Q9HCK8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHD8Q9HCK8 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHD8Q9HCK8 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CHD8Q9HCK8 PGAM5P1-201ENST00000518923 814 ntBASIC18.35■□□□□ 0.53
CHD8Q9HCK8 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.35■□□□□ 0.53
CHD8Q9HCK8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHD8Q9HCK8 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHD8Q9HCK8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHD8Q9HCK8 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHD8Q9HCK8 AL162741.1-201ENST00000565563 1558 ntBASIC18.34■□□□□ 0.53
CHD8Q9HCK8 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHD8Q9HCK8 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHD8Q9HCK8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.34■□□□□ 0.53
CHD8Q9HCK8 KRT18P67-201ENST00000432816 1264 ntBASIC18.34■□□□□ 0.53
CHD8Q9HCK8 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.34■□□□□ 0.53
CHD8Q9HCK8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.34■□□□□ 0.53
CHD8Q9HCK8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHD8Q9HCK8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.34■□□□□ 0.53
CHD8Q9HCK8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHD8Q9HCK8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CHD8Q9HCK8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
CHD8Q9HCK8 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.34■□□□□ 0.53
CHD8Q9HCK8 MIR940-201ENST00000401276 94 ntBASIC18.34■□□□□ 0.53
CHD8Q9HCK8 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHD8Q9HCK8 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.34■□□□□ 0.53
CHD8Q9HCK8 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.34■□□□□ 0.53
CHD8Q9HCK8 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.34■□□□□ 0.53
CHD8Q9HCK8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
CHD8Q9HCK8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHD8Q9HCK8 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHD8Q9HCK8 PMS2P7-201ENST00000506558 1336 ntBASIC18.33■□□□□ 0.53
CHD8Q9HCK8 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHD8Q9HCK8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.33■□□□□ 0.53
CHD8Q9HCK8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHD8Q9HCK8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHD8Q9HCK8 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.33■□□□□ 0.53
CHD8Q9HCK8 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHD8Q9HCK8 RASA4DP-201ENST00000460726 1199 ntBASIC18.33■□□□□ 0.52
CHD8Q9HCK8 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.33■□□□□ 0.52
CHD8Q9HCK8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHD8Q9HCK8 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms