Protein–RNA interactions for Protein: Q9H9D4

ZNF408, Zinc finger protein 408, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF408Q9H9D4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
ZNF408Q9H9D4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC23.14■■□□□ 1.29
ZNF408Q9H9D4 PRELID1P1-202ENST00000567272 903 ntBASIC23.14■■□□□ 1.29
ZNF408Q9H9D4 AC092119.3-201ENST00000612618 583 ntBASIC23.14■■□□□ 1.29
ZNF408Q9H9D4 AC083849.1-201ENST00000615227 514 ntBASIC23.14■■□□□ 1.29
ZNF408Q9H9D4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC23.14■■□□□ 1.29
ZNF408Q9H9D4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ZNF408Q9H9D4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
ZNF408Q9H9D4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.29
ZNF408Q9H9D4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
ZNF408Q9H9D4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC23.14■■□□□ 1.29
ZNF408Q9H9D4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF408Q9H9D4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.13■■□□□ 1.29
ZNF408Q9H9D4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF408Q9H9D4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF408Q9H9D4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF408Q9H9D4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC23.13■■□□□ 1.29
ZNF408Q9H9D4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC23.13■■□□□ 1.29
ZNF408Q9H9D4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC23.13■■□□□ 1.29
ZNF408Q9H9D4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC23.13■■□□□ 1.29
ZNF408Q9H9D4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF408Q9H9D4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF408Q9H9D4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
ZNF408Q9H9D4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
ZNF408Q9H9D4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF408Q9H9D4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF408Q9H9D4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.12■■□□□ 1.29
ZNF408Q9H9D4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZNF408Q9H9D4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC23.12■■□□□ 1.29
ZNF408Q9H9D4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ZNF408Q9H9D4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZNF408Q9H9D4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZNF408Q9H9D4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZNF408Q9H9D4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ZNF408Q9H9D4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ZNF408Q9H9D4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC23.12■■□□□ 1.29
ZNF408Q9H9D4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ZNF408Q9H9D4 AL845331.1-201ENST00000424978 1190 ntBASIC23.12■■□□□ 1.29
ZNF408Q9H9D4 ATP5G2P1-201ENST00000433580 426 ntBASIC23.12■■□□□ 1.29
ZNF408Q9H9D4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ZNF408Q9H9D4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC23.12■■□□□ 1.29
ZNF408Q9H9D4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
ZNF408Q9H9D4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZNF408Q9H9D4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC23.12■■□□□ 1.29
ZNF408Q9H9D4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
ZNF408Q9H9D4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
ZNF408Q9H9D4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC23.11■■□□□ 1.29
ZNF408Q9H9D4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF408Q9H9D4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF408Q9H9D4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF408Q9H9D4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF408Q9H9D4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF408Q9H9D4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF408Q9H9D4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF408Q9H9D4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC23.11■■□□□ 1.29
ZNF408Q9H9D4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ZNF408Q9H9D4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC23.1■■□□□ 1.29
ZNF408Q9H9D4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
ZNF408Q9H9D4 KRT8P45-201ENST00000414328 1447 ntBASIC23.1■■□□□ 1.29
ZNF408Q9H9D4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ZNF408Q9H9D4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ZNF408Q9H9D4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
ZNF408Q9H9D4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ZNF408Q9H9D4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
ZNF408Q9H9D4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC23.1■■□□□ 1.29
ZNF408Q9H9D4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC23.1■■□□□ 1.29
ZNF408Q9H9D4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC23.1■■□□□ 1.29
ZNF408Q9H9D4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC23.1■■□□□ 1.29
ZNF408Q9H9D4 FDX1P1-201ENST00000449115 551 ntBASIC23.1■■□□□ 1.29
ZNF408Q9H9D4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC23.1■■□□□ 1.29
ZNF408Q9H9D4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC23.1■■□□□ 1.29
ZNF408Q9H9D4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC23.1■■□□□ 1.29
ZNF408Q9H9D4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC23.1■■□□□ 1.29
ZNF408Q9H9D4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
ZNF408Q9H9D4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
ZNF408Q9H9D4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC23.1■■□□□ 1.29
ZNF408Q9H9D4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC23.1■■□□□ 1.29
ZNF408Q9H9D4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC23.1■■□□□ 1.29
ZNF408Q9H9D4 DPP3P2-201ENST00000416030 1696 ntBASIC23.09■■□□□ 1.29
ZNF408Q9H9D4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC23.09■■□□□ 1.29
ZNF408Q9H9D4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZNF408Q9H9D4 KRT16P6-202ENST00000425692 1426 ntBASIC23.09■■□□□ 1.29
ZNF408Q9H9D4 LINC01311-201ENST00000565162 1445 ntBASIC23.09■■□□□ 1.29
ZNF408Q9H9D4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
ZNF408Q9H9D4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC23.09■■□□□ 1.29
ZNF408Q9H9D4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ZNF408Q9H9D4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZNF408Q9H9D4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.09■■□□□ 1.29
ZNF408Q9H9D4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
ZNF408Q9H9D4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZNF408Q9H9D4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC23.09■■□□□ 1.29
ZNF408Q9H9D4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
ZNF408Q9H9D4 AP003041.3-201ENST00000527151 707 ntBASIC23.09■■□□□ 1.29
ZNF408Q9H9D4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC23.09■■□□□ 1.29
ZNF408Q9H9D4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC23.09■■□□□ 1.29
ZNF408Q9H9D4 MIR3652-201ENST00000579335 131 ntBASIC23.09■■□□□ 1.29
ZNF408Q9H9D4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ZNF408Q9H9D4 GPALPP1-207ENST00000611650 899 ntBASIC23.09■■□□□ 1.29
ZNF408Q9H9D4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZNF408Q9H9D4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms