Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.97■□□□□ 0.95
CDH23Q9H251 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.97■□□□□ 0.95
CDH23Q9H251 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH23Q9H251 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
CDH23Q9H251 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDH23Q9H251 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH23Q9H251 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.96■□□□□ 0.95
CDH23Q9H251 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDH23Q9H251 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH23Q9H251 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDH23Q9H251 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
CDH23Q9H251 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDH23Q9H251 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CDH23Q9H251 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH23Q9H251 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDH23Q9H251 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH23Q9H251 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH23Q9H251 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDH23Q9H251 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.96■□□□□ 0.95
CDH23Q9H251 AL512604.3-201ENST00000569583 964 ntBASIC20.96■□□□□ 0.95
CDH23Q9H251 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH23Q9H251 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CDH23Q9H251 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.95■□□□□ 0.94
CDH23Q9H251 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.95■□□□□ 0.94
CDH23Q9H251 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.95■□□□□ 0.94
CDH23Q9H251 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
CDH23Q9H251 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH23Q9H251 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.95■□□□□ 0.94
CDH23Q9H251 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH23Q9H251 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.95■□□□□ 0.94
CDH23Q9H251 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH23Q9H251 AF106564.1-201ENST00000607058 2553 ntBASIC20.95■□□□□ 0.94
CDH23Q9H251 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH23Q9H251 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDH23Q9H251 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.95■□□□□ 0.94
CDH23Q9H251 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CDH23Q9H251 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDH23Q9H251 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDH23Q9H251 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.95■□□□□ 0.94
CDH23Q9H251 AL023973.1-201ENST00000624619 620 ntBASIC20.95■□□□□ 0.94
CDH23Q9H251 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
CDH23Q9H251 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.95■□□□□ 0.94
CDH23Q9H251 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH23Q9H251 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CDH23Q9H251 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.95■□□□□ 0.94
CDH23Q9H251 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDH23Q9H251 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
CDH23Q9H251 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.94■□□□□ 0.94
CDH23Q9H251 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH23Q9H251 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH23Q9H251 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH23Q9H251 Z85996.1-201ENST00000494644 937 ntBASIC20.94■□□□□ 0.94
CDH23Q9H251 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.94■□□□□ 0.94
CDH23Q9H251 AP002469.2-201ENST00000531724 424 ntBASIC20.94■□□□□ 0.94
CDH23Q9H251 SLC25A6P4-201ENST00000586535 553 ntBASIC20.94■□□□□ 0.94
CDH23Q9H251 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.94■□□□□ 0.94
CDH23Q9H251 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.94■□□□□ 0.94
CDH23Q9H251 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.94■□□□□ 0.94
CDH23Q9H251 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.94■□□□□ 0.94
CDH23Q9H251 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.94■□□□□ 0.94
CDH23Q9H251 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.94■□□□□ 0.94
CDH23Q9H251 AL031432.5-201ENST00000641059 760 ntBASIC20.94■□□□□ 0.94
CDH23Q9H251 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH23Q9H251 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.93■□□□□ 0.94
CDH23Q9H251 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH23Q9H251 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH23Q9H251 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH23Q9H251 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH23Q9H251 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDH23Q9H251 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.93■□□□□ 0.94
CDH23Q9H251 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH23Q9H251 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
CDH23Q9H251 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH23Q9H251 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH23Q9H251 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.93■□□□□ 0.94
CDH23Q9H251 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.93■□□□□ 0.94
CDH23Q9H251 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH23Q9H251 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CDH23Q9H251 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.92■□□□□ 0.94
CDH23Q9H251 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
CDH23Q9H251 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.92■□□□□ 0.94
CDH23Q9H251 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.92■□□□□ 0.94
CDH23Q9H251 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH23Q9H251 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.92■□□□□ 0.94
CDH23Q9H251 MIR3652-201ENST00000579335 131 ntBASIC20.92■□□□□ 0.94
CDH23Q9H251 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CDH23Q9H251 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH23Q9H251 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.92■□□□□ 0.94
CDH23Q9H251 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH23Q9H251 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.91■□□□□ 0.94
CDH23Q9H251 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
CDH23Q9H251 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH23Q9H251 KRT8P20-201ENST00000423953 1409 ntBASIC20.91■□□□□ 0.94
CDH23Q9H251 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH23Q9H251 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
CDH23Q9H251 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.91■□□□□ 0.94
CDH23Q9H251 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.91■□□□□ 0.94
CDH23Q9H251 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.91■□□□□ 0.94
CDH23Q9H251 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CDH23Q9H251 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms