Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 AP000974.1-201ENST00000623909 2387 ntBASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 AL512625.2-201ENST00000417533 625 ntBASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 CROCCP5-201ENST00000436658 830 ntBASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TRIM56Q9BRZ2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.97■□□□□ 0.79
TRIM56Q9BRZ2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.97■□□□□ 0.79
TRIM56Q9BRZ2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM56Q9BRZ2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.97■□□□□ 0.79
TRIM56Q9BRZ2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
TRIM56Q9BRZ2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM56Q9BRZ2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM56Q9BRZ2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM56Q9BRZ2 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM56Q9BRZ2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
TRIM56Q9BRZ2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.97■□□□□ 0.79
TRIM56Q9BRZ2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM56Q9BRZ2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM56Q9BRZ2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.97■□□□□ 0.79
TRIM56Q9BRZ2 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM56Q9BRZ2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM56Q9BRZ2 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.97■□□□□ 0.79
TRIM56Q9BRZ2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM56Q9BRZ2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM56Q9BRZ2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TRIM56Q9BRZ2 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM56Q9BRZ2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM56Q9BRZ2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM56Q9BRZ2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM56Q9BRZ2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM56Q9BRZ2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TRIM56Q9BRZ2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM56Q9BRZ2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM56Q9BRZ2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM56Q9BRZ2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM56Q9BRZ2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM56Q9BRZ2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.96■□□□□ 0.79
TRIM56Q9BRZ2 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM56Q9BRZ2 AC105036.2-201ENST00000569468 176 ntBASIC19.96■□□□□ 0.79
TRIM56Q9BRZ2 AC133552.2-202ENST00000575694 574 ntBASIC19.96■□□□□ 0.79
TRIM56Q9BRZ2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM56Q9BRZ2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM56Q9BRZ2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TRIM56Q9BRZ2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TRIM56Q9BRZ2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM56Q9BRZ2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM56Q9BRZ2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM56Q9BRZ2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM56Q9BRZ2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM56Q9BRZ2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM56Q9BRZ2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.95■□□□□ 0.78
TRIM56Q9BRZ2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.95■□□□□ 0.78
TRIM56Q9BRZ2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM56Q9BRZ2 Z82202.1-201ENST00000623446 1880 ntBASIC19.95■□□□□ 0.78
TRIM56Q9BRZ2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM56Q9BRZ2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM56Q9BRZ2 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TRIM56Q9BRZ2 AL020996.1-203ENST00000536896 2307 ntBASIC19.95■□□□□ 0.78
TRIM56Q9BRZ2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM56Q9BRZ2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM56Q9BRZ2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
TRIM56Q9BRZ2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM56Q9BRZ2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TRIM56Q9BRZ2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.95■□□□□ 0.78
TRIM56Q9BRZ2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM56Q9BRZ2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.95■□□□□ 0.78
TRIM56Q9BRZ2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.95■□□□□ 0.78
TRIM56Q9BRZ2 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM56Q9BRZ2 MKRN4P-201ENST00000444706 1521 ntBASIC19.95■□□□□ 0.78
TRIM56Q9BRZ2 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM56Q9BRZ2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM56Q9BRZ2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TRIM56Q9BRZ2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
TRIM56Q9BRZ2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.95■□□□□ 0.78
TRIM56Q9BRZ2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM56Q9BRZ2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM56Q9BRZ2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM56Q9BRZ2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM56Q9BRZ2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM56Q9BRZ2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms