Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.77■□□□□ 0.28
CSMD1Q96PZ7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.77■□□□□ 0.28
CSMD1Q96PZ7 AP002469.2-201ENST00000531724 424 ntBASIC16.77■□□□□ 0.28
CSMD1Q96PZ7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.77■□□□□ 0.28
CSMD1Q96PZ7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.77■□□□□ 0.28
CSMD1Q96PZ7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CSMD1Q96PZ7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CSMD1Q96PZ7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CSMD1Q96PZ7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CSMD1Q96PZ7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CSMD1Q96PZ7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CSMD1Q96PZ7 AC011506.1-201ENST00000474329 610 ntBASIC16.77■□□□□ 0.28
CSMD1Q96PZ7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.77■□□□□ 0.28
CSMD1Q96PZ7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.77■□□□□ 0.28
CSMD1Q96PZ7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.77■□□□□ 0.28
CSMD1Q96PZ7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CSMD1Q96PZ7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CSMD1Q96PZ7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CSMD1Q96PZ7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CSMD1Q96PZ7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CSMD1Q96PZ7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.77■□□□□ 0.27
CSMD1Q96PZ7 AC242852.2-201ENST00000615738 1807 ntBASIC16.77■□□□□ 0.27
CSMD1Q96PZ7 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CSMD1Q96PZ7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.77■□□□□ 0.27
CSMD1Q96PZ7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.77■□□□□ 0.27
CSMD1Q96PZ7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.77■□□□□ 0.27
CSMD1Q96PZ7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CSMD1Q96PZ7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.76■□□□□ 0.27
CSMD1Q96PZ7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSMD1Q96PZ7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSMD1Q96PZ7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.76■□□□□ 0.27
CSMD1Q96PZ7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSMD1Q96PZ7 CCR12P-201ENST00000446203 998 ntBASIC16.76■□□□□ 0.27
CSMD1Q96PZ7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.76■□□□□ 0.27
CSMD1Q96PZ7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSMD1Q96PZ7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSMD1Q96PZ7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSMD1Q96PZ7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSMD1Q96PZ7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.76■□□□□ 0.27
CSMD1Q96PZ7 HOMER2P1-201ENST00000455653 964 ntBASIC16.76■□□□□ 0.27
CSMD1Q96PZ7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSMD1Q96PZ7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSMD1Q96PZ7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSMD1Q96PZ7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSMD1Q96PZ7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSMD1Q96PZ7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CSMD1Q96PZ7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CSMD1Q96PZ7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CSMD1Q96PZ7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.75■□□□□ 0.27
CSMD1Q96PZ7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSMD1Q96PZ7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.75■□□□□ 0.27
CSMD1Q96PZ7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC16.75■□□□□ 0.27
CSMD1Q96PZ7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.75■□□□□ 0.27
CSMD1Q96PZ7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.75■□□□□ 0.27
CSMD1Q96PZ7 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.75■□□□□ 0.27
CSMD1Q96PZ7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CSMD1Q96PZ7 AL136038.3-201ENST00000561909 1096 ntBASIC16.75■□□□□ 0.27
CSMD1Q96PZ7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CSMD1Q96PZ7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSMD1Q96PZ7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.75■□□□□ 0.27
CSMD1Q96PZ7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.75■□□□□ 0.27
CSMD1Q96PZ7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSMD1Q96PZ7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.75■□□□□ 0.27
CSMD1Q96PZ7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSMD1Q96PZ7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSMD1Q96PZ7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSMD1Q96PZ7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CSMD1Q96PZ7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CSMD1Q96PZ7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSMD1Q96PZ7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSMD1Q96PZ7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CSMD1Q96PZ7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSMD1Q96PZ7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CSMD1Q96PZ7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSMD1Q96PZ7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.74■□□□□ 0.27
CSMD1Q96PZ7 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSMD1Q96PZ7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.74■□□□□ 0.27
CSMD1Q96PZ7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.74■□□□□ 0.27
CSMD1Q96PZ7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CSMD1Q96PZ7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.74■□□□□ 0.27
CSMD1Q96PZ7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSMD1Q96PZ7 AC004980.1-204ENST00000429707 299 ntBASIC16.74■□□□□ 0.27
CSMD1Q96PZ7 SPDYE13P-201ENST00000445314 798 ntBASIC16.74■□□□□ 0.27
CSMD1Q96PZ7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.74■□□□□ 0.27
CSMD1Q96PZ7 SLC25A6P4-201ENST00000586535 553 ntBASIC16.74■□□□□ 0.27
CSMD1Q96PZ7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSMD1Q96PZ7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CSMD1Q96PZ7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.74■□□□□ 0.27
CSMD1Q96PZ7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CSMD1Q96PZ7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSMD1Q96PZ7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.74■□□□□ 0.27
CSMD1Q96PZ7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSMD1Q96PZ7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.74■□□□□ 0.27
CSMD1Q96PZ7 PRELID1P1-202ENST00000567272 903 ntBASIC16.74■□□□□ 0.27
CSMD1Q96PZ7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.74■□□□□ 0.27
CSMD1Q96PZ7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CSMD1Q96PZ7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
CSMD1Q96PZ7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSMD1Q96PZ7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.73■□□□□ 0.27
CSMD1Q96PZ7 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms