Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.26■□□□□ 0.03
DUX3Q96PT4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.26■□□□□ 0.03
DUX3Q96PT4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.26■□□□□ 0.03
DUX3Q96PT4 RARRES2P10-201ENST00000564312 460 ntBASIC15.26■□□□□ 0.03
DUX3Q96PT4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.26■□□□□ 0.03
DUX3Q96PT4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DUX3Q96PT4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
DUX3Q96PT4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUX3Q96PT4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
DUX3Q96PT4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DUX3Q96PT4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DUX3Q96PT4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
DUX3Q96PT4 AL135905.2-201ENST00000584934 1404 ntBASIC15.26■□□□□ 0.03
DUX3Q96PT4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
DUX3Q96PT4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
DUX3Q96PT4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUX3Q96PT4 AC073314.1-201ENST00000568729 2216 ntBASIC15.25■□□□□ 0.03
DUX3Q96PT4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DUX3Q96PT4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUX3Q96PT4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUX3Q96PT4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUX3Q96PT4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DUX3Q96PT4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUX3Q96PT4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC15.25■□□□□ 0.03
DUX3Q96PT4 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.25■□□□□ 0.03
DUX3Q96PT4 KRT16P5-201ENST00000455284 522 ntBASIC15.25■□□□□ 0.03
DUX3Q96PT4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC15.25■□□□□ 0.03
DUX3Q96PT4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.25■□□□□ 0.03
DUX3Q96PT4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DUX3Q96PT4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
DUX3Q96PT4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUX3Q96PT4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUX3Q96PT4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.25■□□□□ 0.03
DUX3Q96PT4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DUX3Q96PT4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DUX3Q96PT4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
DUX3Q96PT4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DUX3Q96PT4 KRT16P6-202ENST00000425692 1426 ntBASIC15.25■□□□□ 0.03
DUX3Q96PT4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUX3Q96PT4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
DUX3Q96PT4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX3Q96PT4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
DUX3Q96PT4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
DUX3Q96PT4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.24■□□□□ 0.03
DUX3Q96PT4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX3Q96PT4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX3Q96PT4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.24■□□□□ 0.03
DUX3Q96PT4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX3Q96PT4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX3Q96PT4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
DUX3Q96PT4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX3Q96PT4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX3Q96PT4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX3Q96PT4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX3Q96PT4 FAM197Y1-201ENST00000421178 764 ntBASIC15.24■□□□□ 0.03
DUX3Q96PT4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.24■□□□□ 0.03
DUX3Q96PT4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC15.24■□□□□ 0.03
DUX3Q96PT4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
DUX3Q96PT4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.24■□□□□ 0.03
DUX3Q96PT4 AC004264.1-201ENST00000608354 794 ntBASIC15.24■□□□□ 0.03
DUX3Q96PT4 AP001412.1-201ENST00000608405 714 ntBASIC15.24■□□□□ 0.03
DUX3Q96PT4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX3Q96PT4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
DUX3Q96PT4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX3Q96PT4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
DUX3Q96PT4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX3Q96PT4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX3Q96PT4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
DUX3Q96PT4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX3Q96PT4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX3Q96PT4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX3Q96PT4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC15.24■□□□□ 0.03
DUX3Q96PT4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX3Q96PT4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC15.24■□□□□ 0.03
DUX3Q96PT4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
DUX3Q96PT4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUX3Q96PT4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUX3Q96PT4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUX3Q96PT4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
DUX3Q96PT4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
DUX3Q96PT4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUX3Q96PT4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUX3Q96PT4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
DUX3Q96PT4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.23■□□□□ 0.03
DUX3Q96PT4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
DUX3Q96PT4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
DUX3Q96PT4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
DUX3Q96PT4 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.23■□□□□ 0.03
DUX3Q96PT4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
DUX3Q96PT4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.23■□□□□ 0.03
DUX3Q96PT4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
DUX3Q96PT4 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.23■□□□□ 0.03
DUX3Q96PT4 AF186192.3-201ENST00000583427 947 ntBASIC15.23■□□□□ 0.03
DUX3Q96PT4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.23■□□□□ 0.03
DUX3Q96PT4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUX3Q96PT4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUX3Q96PT4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUX3Q96PT4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUX3Q96PT4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
DUX3Q96PT4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms