Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ANKRD20A18P-201ENST00000359341 492 ntBASIC24.01■■□□□ 1.43
SNED1Q8TER0 GXYLT1P6-201ENST00000456472 1187 ntBASIC24.01■■□□□ 1.43
SNED1Q8TER0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC24.01■■□□□ 1.43
SNED1Q8TER0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
SNED1Q8TER0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC24■■□□□ 1.43
SNED1Q8TER0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
SNED1Q8TER0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SNED1Q8TER0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SNED1Q8TER0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC24■■□□□ 1.43
SNED1Q8TER0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC24■■□□□ 1.43
SNED1Q8TER0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SNED1Q8TER0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
SNED1Q8TER0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
SNED1Q8TER0 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC24■■□□□ 1.43
SNED1Q8TER0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC24■■□□□ 1.43
SNED1Q8TER0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC24■■□□□ 1.43
SNED1Q8TER0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC24■■□□□ 1.43
SNED1Q8TER0 AL441883.1-201ENST00000566170 1045 ntBASIC24■■□□□ 1.43
SNED1Q8TER0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC24■■□□□ 1.43
SNED1Q8TER0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC24■■□□□ 1.43
SNED1Q8TER0 AC005332.1-201ENST00000577698 1310 ntBASIC24■■□□□ 1.43
SNED1Q8TER0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SNED1Q8TER0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
SNED1Q8TER0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
SNED1Q8TER0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SNED1Q8TER0 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SNED1Q8TER0 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC23.99■■□□□ 1.43
SNED1Q8TER0 KRT18P38-201ENST00000449496 1282 ntBASIC23.99■■□□□ 1.43
SNED1Q8TER0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SNED1Q8TER0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC23.99■■□□□ 1.43
SNED1Q8TER0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC23.99■■□□□ 1.43
SNED1Q8TER0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC23.99■■□□□ 1.43
SNED1Q8TER0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SNED1Q8TER0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
SNED1Q8TER0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SNED1Q8TER0 IER3-202ENST00000376377 1350 ntBASIC23.99■■□□□ 1.43
SNED1Q8TER0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC23.99■■□□□ 1.43
SNED1Q8TER0 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SNED1Q8TER0 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SNED1Q8TER0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SNED1Q8TER0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SNED1Q8TER0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
SNED1Q8TER0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SNED1Q8TER0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SNED1Q8TER0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SNED1Q8TER0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC23.98■■□□□ 1.43
SNED1Q8TER0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SNED1Q8TER0 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC23.98■■□□□ 1.43
SNED1Q8TER0 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SNED1Q8TER0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC23.98■■□□□ 1.43
SNED1Q8TER0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SNED1Q8TER0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC23.98■■□□□ 1.43
SNED1Q8TER0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC23.98■■□□□ 1.43
SNED1Q8TER0 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC23.98■■□□□ 1.43
SNED1Q8TER0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC23.98■■□□□ 1.43
SNED1Q8TER0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SNED1Q8TER0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC23.98■■□□□ 1.43
SNED1Q8TER0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SNED1Q8TER0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
SNED1Q8TER0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SNED1Q8TER0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SNED1Q8TER0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC23.97■■□□□ 1.43
SNED1Q8TER0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC23.97■■□□□ 1.43
SNED1Q8TER0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC23.97■■□□□ 1.43
SNED1Q8TER0 AC092647.4-201ENST00000457211 535 ntBASIC23.97■■□□□ 1.43
SNED1Q8TER0 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC23.97■■□□□ 1.43
SNED1Q8TER0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC23.97■■□□□ 1.43
SNED1Q8TER0 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SNED1Q8TER0 AL353719.1-201ENST00000566847 864 ntBASIC23.97■■□□□ 1.43
SNED1Q8TER0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC23.97■■□□□ 1.43
SNED1Q8TER0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC23.97■■□□□ 1.43
SNED1Q8TER0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SNED1Q8TER0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.97■■□□□ 1.43
SNED1Q8TER0 KRT16P6-202ENST00000425692 1426 ntBASIC23.97■■□□□ 1.43
SNED1Q8TER0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SNED1Q8TER0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC23.97■■□□□ 1.43
SNED1Q8TER0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
SNED1Q8TER0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SNED1Q8TER0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.96■■□□□ 1.43
SNED1Q8TER0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC23.96■■□□□ 1.43
SNED1Q8TER0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC23.96■■□□□ 1.43
SNED1Q8TER0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC23.96■■□□□ 1.43
SNED1Q8TER0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC23.96■■□□□ 1.43
SNED1Q8TER0 AC083849.1-201ENST00000615227 514 ntBASIC23.96■■□□□ 1.43
SNED1Q8TER0 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
SNED1Q8TER0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SNED1Q8TER0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SNED1Q8TER0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.43
SNED1Q8TER0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
SNED1Q8TER0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.43
SNED1Q8TER0 TMEM179-206ENST00000616017 1645 ntBASIC23.95■■□□□ 1.43
SNED1Q8TER0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SNED1Q8TER0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC23.95■■□□□ 1.42
SNED1Q8TER0 AL671277.2-201ENST00000458060 996 ntBASIC23.95■■□□□ 1.42
SNED1Q8TER0 AL359075.1-203ENST00000462729 1002 ntBASIC23.95■■□□□ 1.42
SNED1Q8TER0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC23.95■■□□□ 1.42
SNED1Q8TER0 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC23.95■■□□□ 1.42
SNED1Q8TER0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC23.95■■□□□ 1.42
SNED1Q8TER0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC23.95■■□□□ 1.42
SNED1Q8TER0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms