Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.97■□□□□ 0.47
LSMEM1Q8N8F7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LSMEM1Q8N8F7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LSMEM1Q8N8F7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.97■□□□□ 0.47
LSMEM1Q8N8F7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.97■□□□□ 0.47
LSMEM1Q8N8F7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LSMEM1Q8N8F7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.97■□□□□ 0.47
LSMEM1Q8N8F7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.97■□□□□ 0.47
LSMEM1Q8N8F7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.97■□□□□ 0.47
LSMEM1Q8N8F7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.97■□□□□ 0.47
LSMEM1Q8N8F7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LSMEM1Q8N8F7 AC005332.7-201ENST00000614046 2005 ntBASIC17.97■□□□□ 0.47
LSMEM1Q8N8F7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.97■□□□□ 0.47
LSMEM1Q8N8F7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LSMEM1Q8N8F7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LSMEM1Q8N8F7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.97■□□□□ 0.47
LSMEM1Q8N8F7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
LSMEM1Q8N8F7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LSMEM1Q8N8F7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
LSMEM1Q8N8F7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LSMEM1Q8N8F7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSMEM1Q8N8F7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.96■□□□□ 0.47
LSMEM1Q8N8F7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSMEM1Q8N8F7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LSMEM1Q8N8F7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSMEM1Q8N8F7 TFP1-202ENST00000475455 1573 ntBASIC17.96■□□□□ 0.47
LSMEM1Q8N8F7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
LSMEM1Q8N8F7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSMEM1Q8N8F7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSMEM1Q8N8F7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSMEM1Q8N8F7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LSMEM1Q8N8F7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSMEM1Q8N8F7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.96■□□□□ 0.47
LSMEM1Q8N8F7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.96■□□□□ 0.47
LSMEM1Q8N8F7 AC097658.1-201ENST00000475555 843 ntBASIC17.96■□□□□ 0.47
LSMEM1Q8N8F7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.96■□□□□ 0.47
LSMEM1Q8N8F7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.96■□□□□ 0.47
LSMEM1Q8N8F7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LSMEM1Q8N8F7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.96■□□□□ 0.47
LSMEM1Q8N8F7 HLA-B-256ENST00000639848 1089 ntBASIC17.96■□□□□ 0.47
LSMEM1Q8N8F7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSMEM1Q8N8F7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSMEM1Q8N8F7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.96■□□□□ 0.47
LSMEM1Q8N8F7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSMEM1Q8N8F7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSMEM1Q8N8F7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.96■□□□□ 0.47
LSMEM1Q8N8F7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LSMEM1Q8N8F7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LSMEM1Q8N8F7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSMEM1Q8N8F7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
LSMEM1Q8N8F7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.95■□□□□ 0.46
LSMEM1Q8N8F7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSMEM1Q8N8F7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.95■□□□□ 0.46
LSMEM1Q8N8F7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSMEM1Q8N8F7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LSMEM1Q8N8F7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LSMEM1Q8N8F7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LSMEM1Q8N8F7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.95■□□□□ 0.46
LSMEM1Q8N8F7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LSMEM1Q8N8F7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
LSMEM1Q8N8F7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSMEM1Q8N8F7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LSMEM1Q8N8F7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.95■□□□□ 0.46
LSMEM1Q8N8F7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.95■□□□□ 0.46
LSMEM1Q8N8F7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.95■□□□□ 0.46
LSMEM1Q8N8F7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.95■□□□□ 0.46
LSMEM1Q8N8F7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.95■□□□□ 0.46
LSMEM1Q8N8F7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.95■□□□□ 0.46
LSMEM1Q8N8F7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSMEM1Q8N8F7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
LSMEM1Q8N8F7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LSMEM1Q8N8F7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LSMEM1Q8N8F7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
LSMEM1Q8N8F7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.95■□□□□ 0.46
LSMEM1Q8N8F7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LSMEM1Q8N8F7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LSMEM1Q8N8F7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LSMEM1Q8N8F7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSMEM1Q8N8F7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LSMEM1Q8N8F7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LSMEM1Q8N8F7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSMEM1Q8N8F7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LSMEM1Q8N8F7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSMEM1Q8N8F7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSMEM1Q8N8F7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.94■□□□□ 0.46
LSMEM1Q8N8F7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.94■□□□□ 0.46
LSMEM1Q8N8F7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSMEM1Q8N8F7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
LSMEM1Q8N8F7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
LSMEM1Q8N8F7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LSMEM1Q8N8F7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.94■□□□□ 0.46
LSMEM1Q8N8F7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.94■□□□□ 0.46
LSMEM1Q8N8F7 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.94■□□□□ 0.46
LSMEM1Q8N8F7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.94■□□□□ 0.46
LSMEM1Q8N8F7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSMEM1Q8N8F7 AC092666.2-201ENST00000613287 246 ntBASIC17.94■□□□□ 0.46
LSMEM1Q8N8F7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSMEM1Q8N8F7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSMEM1Q8N8F7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.94■□□□□ 0.46
LSMEM1Q8N8F7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms