Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTTNQ86VV8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.3■□□□□ 0.36
RTTNQ86VV8 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.3■□□□□ 0.36
RTTNQ86VV8 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.3■□□□□ 0.36
RTTNQ86VV8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTTNQ86VV8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTTNQ86VV8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTTNQ86VV8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTTNQ86VV8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.3■□□□□ 0.36
RTTNQ86VV8 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.3■□□□□ 0.36
RTTNQ86VV8 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTTNQ86VV8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RTTNQ86VV8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTTNQ86VV8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTTNQ86VV8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.3■□□□□ 0.36
RTTNQ86VV8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTTNQ86VV8 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTTNQ86VV8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTTNQ86VV8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.29■□□□□ 0.36
RTTNQ86VV8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
RTTNQ86VV8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.29■□□□□ 0.36
RTTNQ86VV8 AC060766.5-201ENST00000590539 871 ntBASIC17.29■□□□□ 0.36
RTTNQ86VV8 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTTNQ86VV8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTTNQ86VV8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RTTNQ86VV8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTTNQ86VV8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RTTNQ86VV8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTTNQ86VV8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.29■□□□□ 0.36
RTTNQ86VV8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTTNQ86VV8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.29■□□□□ 0.36
RTTNQ86VV8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.29■□□□□ 0.36
RTTNQ86VV8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.29■□□□□ 0.36
RTTNQ86VV8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.29■□□□□ 0.36
RTTNQ86VV8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.29■□□□□ 0.36
RTTNQ86VV8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTTNQ86VV8 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.29■□□□□ 0.36
RTTNQ86VV8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTTNQ86VV8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTTNQ86VV8 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
RTTNQ86VV8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.28■□□□□ 0.36
RTTNQ86VV8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTTNQ86VV8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RTTNQ86VV8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTTNQ86VV8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTTNQ86VV8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.28■□□□□ 0.36
RTTNQ86VV8 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.28■□□□□ 0.36
RTTNQ86VV8 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.28■□□□□ 0.36
RTTNQ86VV8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTTNQ86VV8 AC005829.2-201ENST00000571422 1056 ntBASIC17.28■□□□□ 0.36
RTTNQ86VV8 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.28■□□□□ 0.36
RTTNQ86VV8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.28■□□□□ 0.36
RTTNQ86VV8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTTNQ86VV8 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.28■□□□□ 0.36
RTTNQ86VV8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTTNQ86VV8 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.28■□□□□ 0.36
RTTNQ86VV8 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTTNQ86VV8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTTNQ86VV8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTTNQ86VV8 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTTNQ86VV8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RTTNQ86VV8 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.28■□□□□ 0.36
RTTNQ86VV8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.28■□□□□ 0.36
RTTNQ86VV8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.28■□□□□ 0.36
RTTNQ86VV8 AL031963.3-201ENST00000606441 850 ntBASIC17.28■□□□□ 0.36
RTTNQ86VV8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.28■□□□□ 0.36
RTTNQ86VV8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTTNQ86VV8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RTTNQ86VV8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.28■□□□□ 0.36
RTTNQ86VV8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTTNQ86VV8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RTTNQ86VV8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RTTNQ86VV8 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTTNQ86VV8 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTTNQ86VV8 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTTNQ86VV8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTTNQ86VV8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.27■□□□□ 0.36
RTTNQ86VV8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTTNQ86VV8 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.27■□□□□ 0.36
RTTNQ86VV8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
RTTNQ86VV8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTTNQ86VV8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTTNQ86VV8 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTTNQ86VV8 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RTTNQ86VV8 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTTNQ86VV8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.27■□□□□ 0.36
RTTNQ86VV8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.27■□□□□ 0.36
RTTNQ86VV8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.27■□□□□ 0.36
RTTNQ86VV8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.27■□□□□ 0.36
RTTNQ86VV8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.27■□□□□ 0.36
RTTNQ86VV8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RTTNQ86VV8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTTNQ86VV8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.27■□□□□ 0.36
RTTNQ86VV8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTTNQ86VV8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.27■□□□□ 0.35
RTTNQ86VV8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
RTTNQ86VV8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RTTNQ86VV8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RTTNQ86VV8 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RTTNQ86VV8 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms