Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3bQ80YF6 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3bQ80YF6 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3bQ80YF6 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.28□□□□□ -0.12
Upk3bQ80YF6 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Upk3bQ80YF6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Upk3bQ80YF6 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3bQ80YF6 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.28□□□□□ -0.12
Upk3bQ80YF6 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3bQ80YF6 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3bQ80YF6 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.28□□□□□ -0.12
Upk3bQ80YF6 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3bQ80YF6 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3bQ80YF6 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3bQ80YF6 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3bQ80YF6 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3bQ80YF6 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3bQ80YF6 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3bQ80YF6 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk3bQ80YF6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk3bQ80YF6 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk3bQ80YF6 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk3bQ80YF6 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Upk3bQ80YF6 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3bQ80YF6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3bQ80YF6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3bQ80YF6 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.27□□□□□ -0.13
Upk3bQ80YF6 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3bQ80YF6 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3bQ80YF6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3bQ80YF6 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3bQ80YF6 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3bQ80YF6 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3bQ80YF6 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3bQ80YF6 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Upk3bQ80YF6 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3bQ80YF6 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3bQ80YF6 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3bQ80YF6 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3bQ80YF6 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3bQ80YF6 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3bQ80YF6 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bQ80YF6 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bQ80YF6 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.26□□□□□ -0.13
Upk3bQ80YF6 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bQ80YF6 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Upk3bQ80YF6 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bQ80YF6 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bQ80YF6 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bQ80YF6 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bQ80YF6 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Upk3bQ80YF6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bQ80YF6 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Upk3bQ80YF6 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Upk3bQ80YF6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Upk3bQ80YF6 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bQ80YF6 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bQ80YF6 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.26□□□□□ -0.13
Upk3bQ80YF6 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.26□□□□□ -0.13
Upk3bQ80YF6 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bQ80YF6 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bQ80YF6 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC14.26□□□□□ -0.13
Upk3bQ80YF6 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bQ80YF6 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Upk3bQ80YF6 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bQ80YF6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Upk3bQ80YF6 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bQ80YF6 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bQ80YF6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Upk3bQ80YF6 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bQ80YF6 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bQ80YF6 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Upk3bQ80YF6 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bQ80YF6 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Upk3bQ80YF6 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.25□□□□□ -0.13
Upk3bQ80YF6 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bQ80YF6 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.25□□□□□ -0.13
Upk3bQ80YF6 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bQ80YF6 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bQ80YF6 Gm4974-201ENSMUST00000209974 875 ntBASIC14.25□□□□□ -0.13
Upk3bQ80YF6 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bQ80YF6 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.25□□□□□ -0.13
Upk3bQ80YF6 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bQ80YF6 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bQ80YF6 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Upk3bQ80YF6 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bQ80YF6 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bQ80YF6 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bQ80YF6 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bQ80YF6 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bQ80YF6 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Upk3bQ80YF6 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bQ80YF6 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bQ80YF6 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Upk3bQ80YF6 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bQ80YF6 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bQ80YF6 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Upk3bQ80YF6 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bQ80YF6 Dio3-201ENSMUST00000097228 1449 ntBASIC14.24□□□□□ -0.13
Upk3bQ80YF6 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms