Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC30.46■■■□□ 2.47
CCDC18Q5T9S5 MYC-208ENST00000641036 567 ntBASIC30.46■■■□□ 2.47
CCDC18Q5T9S5 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CCDC18Q5T9S5 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CCDC18Q5T9S5 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CCDC18Q5T9S5 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CCDC18Q5T9S5 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CCDC18Q5T9S5 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CCDC18Q5T9S5 ARMC10P1-201ENST00000313754 855 ntBASIC30.45■■■□□ 2.47
CCDC18Q5T9S5 LIN28AP1-201ENST00000429574 405 ntBASIC30.45■■■□□ 2.47
CCDC18Q5T9S5 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC30.45■■■□□ 2.47
CCDC18Q5T9S5 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC30.45■■■□□ 2.47
CCDC18Q5T9S5 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC30.45■■■□□ 2.47
CCDC18Q5T9S5 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC30.45■■■□□ 2.47
CCDC18Q5T9S5 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC30.45■■■□□ 2.46
CCDC18Q5T9S5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC30.45■■■□□ 2.46
CCDC18Q5T9S5 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC30.45■■■□□ 2.46
CCDC18Q5T9S5 CCR12P-201ENST00000446203 998 ntBASIC30.44■■■□□ 2.46
CCDC18Q5T9S5 NTF6B-201ENST00000591913 560 ntBASIC30.44■■■□□ 2.46
CCDC18Q5T9S5 AC010653.2-201ENST00000623505 997 ntBASIC30.44■■■□□ 2.46
CCDC18Q5T9S5 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC30.44■■■□□ 2.46
CCDC18Q5T9S5 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CCDC18Q5T9S5 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC30.44■■■□□ 2.46
CCDC18Q5T9S5 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
CCDC18Q5T9S5 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
CCDC18Q5T9S5 GOLGA2P11-201ENST00000562660 1621 ntBASIC30.44■■■□□ 2.46
CCDC18Q5T9S5 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CCDC18Q5T9S5 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CCDC18Q5T9S5 DERL1-203ENST00000419562 918 ntTSL 2 BASIC30.44■■■□□ 2.46
CCDC18Q5T9S5 ATP5G1P1-201ENST00000448724 379 ntBASIC30.44■■■□□ 2.46
CCDC18Q5T9S5 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CCDC18Q5T9S5 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CCDC18Q5T9S5 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CCDC18Q5T9S5 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CCDC18Q5T9S5 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC30.43■■■□□ 2.46
CCDC18Q5T9S5 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CCDC18Q5T9S5 AC007375.3-201ENST00000600936 2314 ntBASIC30.43■■■□□ 2.46
CCDC18Q5T9S5 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CCDC18Q5T9S5 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
CCDC18Q5T9S5 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC30.43■■■□□ 2.46
CCDC18Q5T9S5 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC30.43■■■□□ 2.46
CCDC18Q5T9S5 AC020907.5-201ENST00000624372 1936 ntBASIC30.43■■■□□ 2.46
CCDC18Q5T9S5 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CCDC18Q5T9S5 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC30.43■■■□□ 2.46
CCDC18Q5T9S5 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC30.43■■■□□ 2.46
CCDC18Q5T9S5 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC30.43■■■□□ 2.46
CCDC18Q5T9S5 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC30.43■■■□□ 2.46
CCDC18Q5T9S5 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC30.43■■■□□ 2.46
CCDC18Q5T9S5 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CCDC18Q5T9S5 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CCDC18Q5T9S5 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CCDC18Q5T9S5 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CCDC18Q5T9S5 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC30.42■■■□□ 2.46
CCDC18Q5T9S5 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CCDC18Q5T9S5 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC30.42■■■□□ 2.46
CCDC18Q5T9S5 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
CCDC18Q5T9S5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC30.42■■■□□ 2.46
CCDC18Q5T9S5 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC30.42■■■□□ 2.46
CCDC18Q5T9S5 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
CCDC18Q5T9S5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
CCDC18Q5T9S5 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CCDC18Q5T9S5 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CCDC18Q5T9S5 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
CCDC18Q5T9S5 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CCDC18Q5T9S5 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC30.41■■■□□ 2.46
CCDC18Q5T9S5 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CCDC18Q5T9S5 AC007663.1-201ENST00000438948 1240 ntBASIC30.41■■■□□ 2.46
CCDC18Q5T9S5 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC30.41■■■□□ 2.46
CCDC18Q5T9S5 AC063952.2-201ENST00000498792 1227 ntBASIC30.41■■■□□ 2.46
CCDC18Q5T9S5 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC30.41■■■□□ 2.46
CCDC18Q5T9S5 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC30.41■■■□□ 2.46
CCDC18Q5T9S5 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC30.41■■■□□ 2.46
CCDC18Q5T9S5 AL138966.2-201ENST00000621997 464 ntBASIC30.41■■■□□ 2.46
CCDC18Q5T9S5 AC116562.4-202ENST00000641738 218 ntBASIC30.41■■■□□ 2.46
CCDC18Q5T9S5 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
CCDC18Q5T9S5 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CCDC18Q5T9S5 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
CCDC18Q5T9S5 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC30.4■■■□□ 2.46
CCDC18Q5T9S5 AC092338.2-201ENST00000568827 1415 ntBASIC30.4■■■□□ 2.46
CCDC18Q5T9S5 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
CCDC18Q5T9S5 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
CCDC18Q5T9S5 AC117947.1-201ENST00000427448 529 ntBASIC30.4■■■□□ 2.46
CCDC18Q5T9S5 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC30.4■■■□□ 2.46
CCDC18Q5T9S5 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC30.4■■■□□ 2.46
CCDC18Q5T9S5 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC30.4■■■□□ 2.46
CCDC18Q5T9S5 AL160286.2-201ENST00000567150 934 ntBASIC30.4■■■□□ 2.46
CCDC18Q5T9S5 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC30.4■■■□□ 2.46
CCDC18Q5T9S5 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CCDC18Q5T9S5 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC30.4■■■□□ 2.46
CCDC18Q5T9S5 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
CCDC18Q5T9S5 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CCDC18Q5T9S5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CCDC18Q5T9S5 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC30.39■■■□□ 2.46
CCDC18Q5T9S5 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CCDC18Q5T9S5 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CCDC18Q5T9S5 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC30.39■■■□□ 2.46
CCDC18Q5T9S5 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC30.39■■■□□ 2.45
CCDC18Q5T9S5 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
CCDC18Q5T9S5 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CCDC18Q5T9S5 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC30.38■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms