Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.12■□□□□ 0.33
LRRK2Q5S007 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRK2Q5S007 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRK2Q5S007 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
LRRK2Q5S007 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
LRRK2Q5S007 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.11■□□□□ 0.33
LRRK2Q5S007 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.11■□□□□ 0.33
LRRK2Q5S007 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRK2Q5S007 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRK2Q5S007 AC092865.5-201ENST00000545435 363 ntBASIC17.11■□□□□ 0.33
LRRK2Q5S007 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRK2Q5S007 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRK2Q5S007 AC018553.1-201ENST00000616682 1458 ntBASIC17.11■□□□□ 0.33
LRRK2Q5S007 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LRRK2Q5S007 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRK2Q5S007 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRK2Q5S007 SLC25A1P1-201ENST00000528351 927 ntBASIC17.1■□□□□ 0.33
LRRK2Q5S007 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
LRRK2Q5S007 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRK2Q5S007 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRK2Q5S007 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.1■□□□□ 0.33
LRRK2Q5S007 LINC01311-201ENST00000565162 1445 ntBASIC17.1■□□□□ 0.33
LRRK2Q5S007 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.1■□□□□ 0.33
LRRK2Q5S007 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRK2Q5S007 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRK2Q5S007 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LRRK2Q5S007 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRK2Q5S007 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRK2Q5S007 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
LRRK2Q5S007 MIR574-201ENST00000385209 96 ntBASIC17.1■□□□□ 0.33
LRRK2Q5S007 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRK2Q5S007 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.1■□□□□ 0.33
LRRK2Q5S007 CHCHD2P8-201ENST00000429873 447 ntBASIC17.1■□□□□ 0.33
LRRK2Q5S007 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.1■□□□□ 0.33
LRRK2Q5S007 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRK2Q5S007 AC016734.2-201ENST00000624325 1377 ntBASIC17.1■□□□□ 0.33
LRRK2Q5S007 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRK2Q5S007 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRK2Q5S007 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRK2Q5S007 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
LRRK2Q5S007 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.09■□□□□ 0.33
LRRK2Q5S007 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.09■□□□□ 0.33
LRRK2Q5S007 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRK2Q5S007 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRK2Q5S007 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRK2Q5S007 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRK2Q5S007 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRK2Q5S007 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRK2Q5S007 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRK2Q5S007 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRK2Q5S007 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRK2Q5S007 AC012615.1-201ENST00000565797 1299 ntBASIC17.09■□□□□ 0.33
LRRK2Q5S007 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
LRRK2Q5S007 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRK2Q5S007 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
LRRK2Q5S007 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.09■□□□□ 0.33
LRRK2Q5S007 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRK2Q5S007 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.09■□□□□ 0.33
LRRK2Q5S007 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRK2Q5S007 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
LRRK2Q5S007 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.08■□□□□ 0.33
LRRK2Q5S007 AC079781.3-201ENST00000449110 356 ntBASIC17.08■□□□□ 0.33
LRRK2Q5S007 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.08■□□□□ 0.33
LRRK2Q5S007 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.08■□□□□ 0.33
LRRK2Q5S007 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
LRRK2Q5S007 AL121672.3-201ENST00000608644 468 ntBASIC17.08■□□□□ 0.33
LRRK2Q5S007 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.08■□□□□ 0.33
LRRK2Q5S007 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRK2Q5S007 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRK2Q5S007 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRK2Q5S007 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.08■□□□□ 0.32
LRRK2Q5S007 KRT18P1-202ENST00000452408 1331 ntBASIC17.08■□□□□ 0.32
LRRK2Q5S007 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
LRRK2Q5S007 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRK2Q5S007 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRK2Q5S007 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRK2Q5S007 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRK2Q5S007 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
LRRK2Q5S007 BX842568.4-201ENST00000421222 227 ntBASIC17.08■□□□□ 0.32
LRRK2Q5S007 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRK2Q5S007 NUS1P1-201ENST00000446295 882 ntBASIC17.08■□□□□ 0.32
LRRK2Q5S007 AC092597.1-201ENST00000487352 616 ntBASIC17.08■□□□□ 0.32
LRRK2Q5S007 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.08■□□□□ 0.32
LRRK2Q5S007 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.08■□□□□ 0.32
LRRK2Q5S007 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.08■□□□□ 0.32
LRRK2Q5S007 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
LRRK2Q5S007 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
LRRK2Q5S007 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.08■□□□□ 0.32
LRRK2Q5S007 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
LRRK2Q5S007 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRK2Q5S007 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRRK2Q5S007 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.08■□□□□ 0.32
LRRK2Q5S007 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRK2Q5S007 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.07■□□□□ 0.32
LRRK2Q5S007 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRK2Q5S007 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.07■□□□□ 0.32
LRRK2Q5S007 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
LRRK2Q5S007 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRK2Q5S007 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRK2Q5S007 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms