Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RFC3P40938 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RFC3P40938 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFC3P40938 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RFC3P40938 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
RFC3P40938 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RFC3P40938 AL353807.1-201ENST00000427475 662 ntBASIC17.96■□□□□ 0.47
RFC3P40938 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.96■□□□□ 0.47
RFC3P40938 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.96■□□□□ 0.47
RFC3P40938 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.96■□□□□ 0.47
RFC3P40938 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFC3P40938 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
RFC3P40938 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFC3P40938 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.96■□□□□ 0.47
RFC3P40938 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RFC3P40938 AC116351.2-201ENST00000606540 1585 ntBASIC17.96■□□□□ 0.46
RFC3P40938 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.46
RFC3P40938 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.96■□□□□ 0.46
RFC3P40938 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFC3P40938 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFC3P40938 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFC3P40938 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFC3P40938 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFC3P40938 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.95■□□□□ 0.46
RFC3P40938 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFC3P40938 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RFC3P40938 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.95■□□□□ 0.46
RFC3P40938 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.95■□□□□ 0.46
RFC3P40938 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.95■□□□□ 0.46
RFC3P40938 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RFC3P40938 AC073195.1-201ENST00000607241 877 ntBASIC17.95■□□□□ 0.46
RFC3P40938 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFC3P40938 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.95■□□□□ 0.46
RFC3P40938 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFC3P40938 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFC3P40938 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RFC3P40938 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFC3P40938 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFC3P40938 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.95■□□□□ 0.46
RFC3P40938 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFC3P40938 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.94■□□□□ 0.46
RFC3P40938 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFC3P40938 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFC3P40938 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFC3P40938 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFC3P40938 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFC3P40938 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFC3P40938 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFC3P40938 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFC3P40938 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.94■□□□□ 0.46
RFC3P40938 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.94■□□□□ 0.46
RFC3P40938 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.94■□□□□ 0.46
RFC3P40938 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.94■□□□□ 0.46
RFC3P40938 CR392000.1-201ENST00000624770 1228 ntBASIC17.94■□□□□ 0.46
RFC3P40938 AC133561.5-201ENST00000635547 218 ntBASIC17.94■□□□□ 0.46
RFC3P40938 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFC3P40938 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RFC3P40938 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFC3P40938 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RFC3P40938 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFC3P40938 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.94■□□□□ 0.46
RFC3P40938 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RFC3P40938 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFC3P40938 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFC3P40938 PHGDH-210ENST00000641115 1638 ntBASIC17.94■□□□□ 0.46
RFC3P40938 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.94■□□□□ 0.46
RFC3P40938 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFC3P40938 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFC3P40938 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.93■□□□□ 0.46
RFC3P40938 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
RFC3P40938 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFC3P40938 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.93■□□□□ 0.46
RFC3P40938 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
RFC3P40938 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.93■□□□□ 0.46
RFC3P40938 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFC3P40938 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFC3P40938 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFC3P40938 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFC3P40938 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
RFC3P40938 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFC3P40938 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFC3P40938 AC087499.1-201ENST00000418141 1075 ntBASIC17.93■□□□□ 0.46
RFC3P40938 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.93■□□□□ 0.46
RFC3P40938 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
RFC3P40938 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.93■□□□□ 0.46
RFC3P40938 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RFC3P40938 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.93■□□□□ 0.46
RFC3P40938 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.93■□□□□ 0.46
RFC3P40938 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFC3P40938 AC020907.5-201ENST00000624372 1936 ntBASIC17.93■□□□□ 0.46
RFC3P40938 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFC3P40938 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.93■□□□□ 0.46
RFC3P40938 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFC3P40938 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.93■□□□□ 0.46
RFC3P40938 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFC3P40938 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.93■□□□□ 0.46
RFC3P40938 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.93■□□□□ 0.46
RFC3P40938 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.93■□□□□ 0.46
RFC3P40938 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFC3P40938 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms