Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.63■□□□□ 0.57
RPL3P39023 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPL3P39023 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPL3P39023 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.63■□□□□ 0.57
RPL3P39023 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.63■□□□□ 0.57
RPL3P39023 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPL3P39023 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPL3P39023 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.63■□□□□ 0.57
RPL3P39023 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPL3P39023 AC018445.3-201ENST00000624177 1945 ntBASIC18.62■□□□□ 0.57
RPL3P39023 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.62■□□□□ 0.57
RPL3P39023 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPL3P39023 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.62■□□□□ 0.57
RPL3P39023 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.62■□□□□ 0.57
RPL3P39023 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPL3P39023 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPL3P39023 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPL3P39023 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.62■□□□□ 0.57
RPL3P39023 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.62■□□□□ 0.57
RPL3P39023 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.62■□□□□ 0.57
RPL3P39023 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.62■□□□□ 0.57
RPL3P39023 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.62■□□□□ 0.57
RPL3P39023 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPL3P39023 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPL3P39023 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPL3P39023 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPL3P39023 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPL3P39023 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.62■□□□□ 0.57
RPL3P39023 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPL3P39023 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPL3P39023 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RPL3P39023 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RPL3P39023 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPL3P39023 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPL3P39023 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RPL3P39023 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RPL3P39023 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.61■□□□□ 0.57
RPL3P39023 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RPL3P39023 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPL3P39023 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
RPL3P39023 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.61■□□□□ 0.57
RPL3P39023 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.61■□□□□ 0.57
RPL3P39023 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.61■□□□□ 0.57
RPL3P39023 DUSP5P2-201ENST00000426873 1033 ntBASIC18.61■□□□□ 0.57
RPL3P39023 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RPL3P39023 AC083906.2-201ENST00000511578 360 ntBASIC18.61■□□□□ 0.57
RPL3P39023 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.61■□□□□ 0.57
RPL3P39023 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.61■□□□□ 0.57
RPL3P39023 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RPL3P39023 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RPL3P39023 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RPL3P39023 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPL3P39023 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPL3P39023 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPL3P39023 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RPL3P39023 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RPL3P39023 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.61■□□□□ 0.57
RPL3P39023 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPL3P39023 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPL3P39023 TFP1-202ENST00000475455 1573 ntBASIC18.6■□□□□ 0.57
RPL3P39023 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPL3P39023 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RPL3P39023 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPL3P39023 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPL3P39023 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.6■□□□□ 0.57
RPL3P39023 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPL3P39023 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPL3P39023 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPL3P39023 MIR935-201ENST00000401179 91 ntBASIC18.6■□□□□ 0.57
RPL3P39023 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.6■□□□□ 0.57
RPL3P39023 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.6■□□□□ 0.57
RPL3P39023 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.6■□□□□ 0.57
RPL3P39023 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
RPL3P39023 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.6■□□□□ 0.57
RPL3P39023 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.6■□□□□ 0.57
RPL3P39023 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.6■□□□□ 0.57
RPL3P39023 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPL3P39023 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.6■□□□□ 0.57
RPL3P39023 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.6■□□□□ 0.57
RPL3P39023 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.6■□□□□ 0.57
RPL3P39023 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPL3P39023 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.6■□□□□ 0.57
RPL3P39023 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPL3P39023 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPL3P39023 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPL3P39023 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.6■□□□□ 0.57
RPL3P39023 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.6■□□□□ 0.57
RPL3P39023 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.59■□□□□ 0.57
RPL3P39023 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPL3P39023 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.59■□□□□ 0.57
RPL3P39023 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
RPL3P39023 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.59■□□□□ 0.57
RPL3P39023 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPL3P39023 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RPL3P39023 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPL3P39023 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPL3P39023 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.59■□□□□ 0.57
RPL3P39023 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPL3P39023 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPL3P39023 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms