Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
SLC6A4P31645 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC6A4P31645 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC6A4P31645 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC6A4P31645 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC6A4P31645 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC6A4P31645 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC6A4P31645 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC6A4P31645 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC6A4P31645 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC6A4P31645 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.19■□□□□ 0.82
SLC6A4P31645 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SLC6A4P31645 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC6A4P31645 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC6A4P31645 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
SLC6A4P31645 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC6A4P31645 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC6A4P31645 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC6A4P31645 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC6A4P31645 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC6A4P31645 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
SLC6A4P31645 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.18■□□□□ 0.82
SLC6A4P31645 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC6A4P31645 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SLC6A4P31645 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC6A4P31645 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC6A4P31645 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC6A4P31645 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.18■□□□□ 0.82
SLC6A4P31645 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC6A4P31645 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC6A4P31645 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC6A4P31645 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.18■□□□□ 0.82
SLC6A4P31645 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.18■□□□□ 0.82
SLC6A4P31645 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SLC6A4P31645 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.18■□□□□ 0.82
SLC6A4P31645 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC6A4P31645 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC6A4P31645 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC6A4P31645 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC6A4P31645 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC6A4P31645 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
SLC6A4P31645 TSPY15P-201ENST00000457163 923 ntBASIC20.17■□□□□ 0.82
SLC6A4P31645 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.17■□□□□ 0.82
SLC6A4P31645 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC6A4P31645 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC6A4P31645 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC6A4P31645 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SLC6A4P31645 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC6A4P31645 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC6A4P31645 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC6A4P31645 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC6A4P31645 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC6A4P31645 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC6A4P31645 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC6A4P31645 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SLC6A4P31645 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A4P31645 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A4P31645 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.16■□□□□ 0.82
SLC6A4P31645 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A4P31645 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A4P31645 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC6A4P31645 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A4P31645 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A4P31645 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A4P31645 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC6A4P31645 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.16■□□□□ 0.82
SLC6A4P31645 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC6A4P31645 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A4P31645 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A4P31645 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.16■□□□□ 0.82
SLC6A4P31645 AC026471.5-201ENST00000615068 467 ntBASIC20.16■□□□□ 0.82
SLC6A4P31645 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC6A4P31645 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.16■□□□□ 0.82
SLC6A4P31645 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC6A4P31645 CR392000.1-201ENST00000624770 1228 ntBASIC20.16■□□□□ 0.82
SLC6A4P31645 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC6A4P31645 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC6A4P31645 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A4P31645 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A4P31645 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.16■□□□□ 0.82
SLC6A4P31645 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A4P31645 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A4P31645 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A4P31645 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SLC6A4P31645 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A4P31645 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.16■□□□□ 0.82
SLC6A4P31645 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A4P31645 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLC6A4P31645 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLC6A4P31645 PCDHAC2-203ENST00000615316 3011 ntBASIC20.15■□□□□ 0.82
SLC6A4P31645 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC6A4P31645 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SLC6A4P31645 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.15■□□□□ 0.82
SLC6A4P31645 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SLC6A4P31645 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.15■□□□□ 0.82
SLC6A4P31645 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.15■□□□□ 0.82
SLC6A4P31645 KSR1P1-201ENST00000446298 240 ntBASIC20.15■□□□□ 0.82
SLC6A4P31645 MIR4785-201ENST00000585005 73 ntBASIC20.15■□□□□ 0.82
SLC6A4P31645 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.15■□□□□ 0.82
SLC6A4P31645 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms