Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PTPN1P18031 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PTPN1P18031 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
PTPN1P18031 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PTPN1P18031 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PTPN1P18031 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.83■□□□□ 0.92
PTPN1P18031 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.82■□□□□ 0.92
PTPN1P18031 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PTPN1P18031 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN1P18031 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PTPN1P18031 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN1P18031 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN1P18031 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN1P18031 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN1P18031 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PTPN1P18031 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN1P18031 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PTPN1P18031 AL353807.1-201ENST00000427475 662 ntBASIC20.82■□□□□ 0.92
PTPN1P18031 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.82■□□□□ 0.92
PTPN1P18031 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.82■□□□□ 0.92
PTPN1P18031 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PTPN1P18031 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN1P18031 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN1P18031 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.82■□□□□ 0.92
PTPN1P18031 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN1P18031 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN1P18031 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN1P18031 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN1P18031 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN1P18031 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN1P18031 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.81■□□□□ 0.92
PTPN1P18031 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN1P18031 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN1P18031 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN1P18031 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.81■□□□□ 0.92
PTPN1P18031 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN1P18031 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PTPN1P18031 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN1P18031 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN1P18031 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN1P18031 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN1P18031 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.81■□□□□ 0.92
PTPN1P18031 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN1P18031 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.81■□□□□ 0.92
PTPN1P18031 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN1P18031 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.81■□□□□ 0.92
PTPN1P18031 AC113410.3-201ENST00000623366 203 ntBASIC20.81■□□□□ 0.92
PTPN1P18031 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN1P18031 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN1P18031 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN1P18031 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN1P18031 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
PTPN1P18031 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.81■□□□□ 0.92
PTPN1P18031 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN1P18031 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN1P18031 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.8■□□□□ 0.92
PTPN1P18031 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN1P18031 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN1P18031 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN1P18031 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.8■□□□□ 0.92
PTPN1P18031 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN1P18031 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN1P18031 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PTPN1P18031 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
PTPN1P18031 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.8■□□□□ 0.92
PTPN1P18031 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.8■□□□□ 0.92
PTPN1P18031 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.8■□□□□ 0.92
PTPN1P18031 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN1P18031 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.8■□□□□ 0.92
PTPN1P18031 C1QL1P1-201ENST00000568105 661 ntBASIC20.8■□□□□ 0.92
PTPN1P18031 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.8■□□□□ 0.92
PTPN1P18031 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.8■□□□□ 0.92
PTPN1P18031 AL353708.3-201ENST00000610272 989 ntBASIC20.8■□□□□ 0.92
PTPN1P18031 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN1P18031 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN1P18031 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PTPN1P18031 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PTPN1P18031 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PTPN1P18031 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.79■□□□□ 0.92
PTPN1P18031 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN1P18031 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.79■□□□□ 0.92
PTPN1P18031 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.79■□□□□ 0.92
PTPN1P18031 SNORA78-201ENST00000459373 127 ntBASIC20.79■□□□□ 0.92
PTPN1P18031 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN1P18031 AP002982.1-201ENST00000492365 877 ntBASIC20.79■□□□□ 0.92
PTPN1P18031 MIR4497-201ENST00000583208 89 ntBASIC20.79■□□□□ 0.92
PTPN1P18031 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN1P18031 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN1P18031 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN1P18031 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN1P18031 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.79■□□□□ 0.92
PTPN1P18031 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN1P18031 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
PTPN1P18031 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN1P18031 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN1P18031 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN1P18031 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN1P18031 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PTPN1P18031 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN1P18031 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms