Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQB2P05538 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.94■□□□□ 0.78
HLA-DQB2P05538 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQB2P05538 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQB2P05538 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.94■□□□□ 0.78
HLA-DQB2P05538 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
HLA-DQB2P05538 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DQB2P05538 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.93■□□□□ 0.78
HLA-DQB2P05538 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.93■□□□□ 0.78
HLA-DQB2P05538 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DQB2P05538 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DQB2P05538 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DQB2P05538 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DQB2P05538 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.93■□□□□ 0.78
HLA-DQB2P05538 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
HLA-DQB2P05538 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.93■□□□□ 0.78
HLA-DQB2P05538 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
HLA-DQB2P05538 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.93■□□□□ 0.78
HLA-DQB2P05538 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.93■□□□□ 0.78
HLA-DQB2P05538 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.93■□□□□ 0.78
HLA-DQB2P05538 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DQB2P05538 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.93■□□□□ 0.78
HLA-DQB2P05538 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DQB2P05538 AC073648.6-201ENST00000641589 218 ntBASIC19.93■□□□□ 0.78
HLA-DQB2P05538 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.93■□□□□ 0.78
HLA-DQB2P05538 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.93■□□□□ 0.78
HLA-DQB2P05538 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
HLA-DQB2P05538 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DQB2P05538 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQB2P05538 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.92■□□□□ 0.78
HLA-DQB2P05538 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQB2P05538 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
HLA-DQB2P05538 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
HLA-DQB2P05538 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
HLA-DQB2P05538 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQB2P05538 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
HLA-DQB2P05538 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQB2P05538 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQB2P05538 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQB2P05538 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQB2P05538 YBX1P10-201ENST00000444752 975 ntBASIC19.92■□□□□ 0.78
HLA-DQB2P05538 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.92■□□□□ 0.78
HLA-DQB2P05538 TSPY20P-201ENST00000450910 630 ntBASIC19.92■□□□□ 0.78
HLA-DQB2P05538 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.92■□□□□ 0.78
HLA-DQB2P05538 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.92■□□□□ 0.78
HLA-DQB2P05538 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.92■□□□□ 0.78
HLA-DQB2P05538 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.92■□□□□ 0.78
HLA-DQB2P05538 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQB2P05538 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQB2P05538 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQB2P05538 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQB2P05538 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HLA-DQB2P05538 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQB2P05538 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HLA-DQB2P05538 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQB2P05538 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HLA-DQB2P05538 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HLA-DQB2P05538 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQB2P05538 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQB2P05538 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
HLA-DQB2P05538 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQB2P05538 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQB2P05538 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQB2P05538 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
HLA-DQB2P05538 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQB2P05538 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQB2P05538 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQB2P05538 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.91■□□□□ 0.78
HLA-DQB2P05538 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQB2P05538 PRKY-204ENST00000533551 1019 ntBASIC19.91■□□□□ 0.78
HLA-DQB2P05538 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
HLA-DQB2P05538 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.91■□□□□ 0.78
HLA-DQB2P05538 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQB2P05538 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQB2P05538 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQB2P05538 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
HLA-DQB2P05538 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQB2P05538 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
HLA-DQB2P05538 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.91■□□□□ 0.78
HLA-DQB2P05538 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQB2P05538 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.9■□□□□ 0.78
HLA-DQB2P05538 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
HLA-DQB2P05538 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQB2P05538 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQB2P05538 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQB2P05538 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQB2P05538 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQB2P05538 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQB2P05538 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.9■□□□□ 0.78
HLA-DQB2P05538 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.9■□□□□ 0.78
HLA-DQB2P05538 AC128676.1-201ENST00000454392 318 ntBASIC19.9■□□□□ 0.78
HLA-DQB2P05538 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.9■□□□□ 0.78
HLA-DQB2P05538 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.9■□□□□ 0.78
HLA-DQB2P05538 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQB2P05538 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQB2P05538 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQB2P05538 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQB2P05538 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.9■□□□□ 0.78
HLA-DQB2P05538 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQB2P05538 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms