Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC30.73■■■□□ 2.51
PCF11O94913 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
PCF11O94913 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC30.73■■■□□ 2.51
PCF11O94913 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PCF11O94913 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
PCF11O94913 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
PCF11O94913 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
PCF11O94913 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC30.73■■■□□ 2.51
PCF11O94913 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PCF11O94913 MFAP1P1-201ENST00000442257 1255 ntBASIC30.73■■■□□ 2.51
PCF11O94913 ECEL1P2-202ENST00000465689 757 ntBASIC30.73■■■□□ 2.51
PCF11O94913 AC097488.1-201ENST00000507834 756 ntBASIC30.73■■■□□ 2.51
PCF11O94913 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC30.73■■■□□ 2.51
PCF11O94913 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC30.73■■■□□ 2.51
PCF11O94913 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC30.73■■■□□ 2.51
PCF11O94913 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
PCF11O94913 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC30.73■■■□□ 2.51
PCF11O94913 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PCF11O94913 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PCF11O94913 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
PCF11O94913 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
PCF11O94913 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
PCF11O94913 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC30.72■■■□□ 2.51
PCF11O94913 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC30.72■■■□□ 2.51
PCF11O94913 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC30.72■■■□□ 2.51
PCF11O94913 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC30.72■■■□□ 2.51
PCF11O94913 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
PCF11O94913 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC30.71■■■□□ 2.51
PCF11O94913 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC30.71■■■□□ 2.51
PCF11O94913 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC30.71■■■□□ 2.51
PCF11O94913 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC30.71■■■□□ 2.51
PCF11O94913 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PCF11O94913 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
PCF11O94913 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PCF11O94913 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PCF11O94913 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PCF11O94913 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC30.71■■■□□ 2.51
PCF11O94913 AC004951.3-201ENST00000418645 1148 ntBASIC30.71■■■□□ 2.51
PCF11O94913 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC30.71■■■□□ 2.51
PCF11O94913 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PCF11O94913 CFL2-205ENST00000555765 632 ntTSL 2 BASIC30.71■■■□□ 2.51
PCF11O94913 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC30.7■■■□□ 2.51
PCF11O94913 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC30.7■■■□□ 2.51
PCF11O94913 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC30.7■■■□□ 2.51
PCF11O94913 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
PCF11O94913 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
PCF11O94913 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC30.7■■■□□ 2.5
PCF11O94913 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC30.7■■■□□ 2.5
PCF11O94913 AC091390.4-202ENST00000476426 537 ntBASIC30.7■■■□□ 2.5
PCF11O94913 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC30.7■■■□□ 2.5
PCF11O94913 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PCF11O94913 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC30.69■■■□□ 2.5
PCF11O94913 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
PCF11O94913 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
PCF11O94913 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
PCF11O94913 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PCF11O94913 CRYGFP-201ENST00000418459 633 ntBASIC30.69■■■□□ 2.5
PCF11O94913 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
PCF11O94913 FAM207BP-201ENST00000447172 505 ntBASIC30.69■■■□□ 2.5
PCF11O94913 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC30.69■■■□□ 2.5
PCF11O94913 DUX4L26-201ENST00000489078 1255 ntBASIC30.69■■■□□ 2.5
PCF11O94913 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC30.69■■■□□ 2.5
PCF11O94913 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC30.69■■■□□ 2.5
PCF11O94913 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC30.69■■■□□ 2.5
PCF11O94913 AL162377.1-201ENST00000618844 1793 ntBASIC30.69■■■□□ 2.5
PCF11O94913 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC30.68■■■□□ 2.5
PCF11O94913 AL691432.2-201ENST00000607222 2038 ntBASIC30.68■■■□□ 2.5
PCF11O94913 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
PCF11O94913 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC30.68■■■□□ 2.5
PCF11O94913 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC30.68■■■□□ 2.5
PCF11O94913 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PCF11O94913 AP000692.2-201ENST00000608391 879 ntBASIC30.68■■■□□ 2.5
PCF11O94913 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
PCF11O94913 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PCF11O94913 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC30.68■■■□□ 2.5
PCF11O94913 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PCF11O94913 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC30.67■■■□□ 2.5
PCF11O94913 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC30.67■■■□□ 2.5
PCF11O94913 AC087388.1-201ENST00000571370 1112 ntBASIC30.67■■■□□ 2.5
PCF11O94913 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC30.67■■■□□ 2.5
PCF11O94913 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PCF11O94913 LINC01465-201ENST00000408887 1940 ntBASIC30.67■■■□□ 2.5
PCF11O94913 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC30.67■■■□□ 2.5
PCF11O94913 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PCF11O94913 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
PCF11O94913 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
PCF11O94913 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC30.66■■■□□ 2.5
PCF11O94913 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC30.66■■■□□ 2.5
PCF11O94913 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC30.66■■■□□ 2.5
PCF11O94913 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PCF11O94913 NMU-205ENST00000511469 756 ntTSL 3 BASIC30.66■■■□□ 2.5
PCF11O94913 GLRB-205ENST00000512619 728 ntTSL 3 BASIC30.66■■■□□ 2.5
PCF11O94913 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
PCF11O94913 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
PCF11O94913 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
PCF11O94913 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
PCF11O94913 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC30.66■■■□□ 2.5
PCF11O94913 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
PCF11O94913 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC30.65■■■□□ 2.5
PCF11O94913 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC30.65■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms