Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP1O94782 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP1O94782 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP1O94782 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP1O94782 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP1O94782 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.84■□□□□ 0.77
USP1O94782 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.84■□□□□ 0.77
USP1O94782 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP1O94782 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
USP1O94782 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.84■□□□□ 0.77
USP1O94782 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP1O94782 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.84■□□□□ 0.77
USP1O94782 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
USP1O94782 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.84■□□□□ 0.77
USP1O94782 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.84■□□□□ 0.77
USP1O94782 BX276092.2-201ENST00000417668 665 ntBASIC19.84■□□□□ 0.77
USP1O94782 AC006970.2-201ENST00000450065 779 ntBASIC19.84■□□□□ 0.77
USP1O94782 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.84■□□□□ 0.77
USP1O94782 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.84■□□□□ 0.77
USP1O94782 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
USP1O94782 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
USP1O94782 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP1O94782 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.84■□□□□ 0.77
USP1O94782 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP1O94782 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
USP1O94782 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
USP1O94782 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.83■□□□□ 0.77
USP1O94782 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.83■□□□□ 0.77
USP1O94782 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.83■□□□□ 0.77
USP1O94782 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
USP1O94782 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP1O94782 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.83■□□□□ 0.77
USP1O94782 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.83■□□□□ 0.77
USP1O94782 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
USP1O94782 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
USP1O94782 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.83■□□□□ 0.77
USP1O94782 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.83■□□□□ 0.77
USP1O94782 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP1O94782 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
USP1O94782 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
USP1O94782 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.83■□□□□ 0.76
USP1O94782 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.83■□□□□ 0.76
USP1O94782 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
USP1O94782 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP1O94782 BX323043.1-201ENST00000641006 1765 ntBASIC19.83■□□□□ 0.76
USP1O94782 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP1O94782 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP1O94782 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP1O94782 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
USP1O94782 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.82■□□□□ 0.76
USP1O94782 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP1O94782 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
USP1O94782 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.82■□□□□ 0.76
USP1O94782 HLA-L-209ENST00000420110 1011 ntBASIC19.82■□□□□ 0.76
USP1O94782 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.82■□□□□ 0.76
USP1O94782 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.82■□□□□ 0.76
USP1O94782 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
USP1O94782 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP1O94782 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP1O94782 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP1O94782 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
USP1O94782 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.82■□□□□ 0.76
USP1O94782 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP1O94782 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
USP1O94782 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
USP1O94782 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP1O94782 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP1O94782 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.81■□□□□ 0.76
USP1O94782 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.81■□□□□ 0.76
USP1O94782 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.81■□□□□ 0.76
USP1O94782 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.81■□□□□ 0.76
USP1O94782 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.81■□□□□ 0.76
USP1O94782 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP1O94782 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
USP1O94782 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.81■□□□□ 0.76
USP1O94782 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.81■□□□□ 0.76
USP1O94782 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP1O94782 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP1O94782 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
USP1O94782 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.81■□□□□ 0.76
USP1O94782 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
USP1O94782 AL121832.2-201ENST00000610979 668 ntBASIC19.81■□□□□ 0.76
USP1O94782 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
USP1O94782 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.81■□□□□ 0.76
USP1O94782 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP1O94782 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
USP1O94782 Z82202.1-201ENST00000623446 1880 ntBASIC19.81■□□□□ 0.76
USP1O94782 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP1O94782 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP1O94782 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP1O94782 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP1O94782 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.81■□□□□ 0.76
USP1O94782 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP1O94782 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP1O94782 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP1O94782 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP1O94782 AC018553.1-201ENST00000616682 1458 ntBASIC19.8■□□□□ 0.76
USP1O94782 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP1O94782 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
USP1O94782 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms