Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SOX1O00570 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SOX1O00570 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SOX1O00570 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.99■□□□□ 0.95
SOX1O00570 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.99■□□□□ 0.95
SOX1O00570 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.99■□□□□ 0.95
SOX1O00570 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SOX1O00570 KRT18P31-201ENST00000506277 1292 ntBASIC20.99■□□□□ 0.95
SOX1O00570 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.99■□□□□ 0.95
SOX1O00570 FOSL1P1-201ENST00000511041 816 ntBASIC20.99■□□□□ 0.95
SOX1O00570 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.99■□□□□ 0.95
SOX1O00570 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.99■□□□□ 0.95
SOX1O00570 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.99■□□□□ 0.95
SOX1O00570 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SOX1O00570 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.99■□□□□ 0.95
SOX1O00570 IL9RP2-201ENST00000423948 1312 ntBASIC20.99■□□□□ 0.95
SOX1O00570 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SOX1O00570 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SOX1O00570 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SOX1O00570 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.98■□□□□ 0.95
SOX1O00570 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SOX1O00570 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.98■□□□□ 0.95
SOX1O00570 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SOX1O00570 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.98■□□□□ 0.95
SOX1O00570 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
SOX1O00570 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.98■□□□□ 0.95
SOX1O00570 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.98■□□□□ 0.95
SOX1O00570 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SOX1O00570 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.98■□□□□ 0.95
SOX1O00570 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.98■□□□□ 0.95
SOX1O00570 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SOX1O00570 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SOX1O00570 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SOX1O00570 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SOX1O00570 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.97■□□□□ 0.95
SOX1O00570 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SOX1O00570 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.97■□□□□ 0.95
SOX1O00570 KRT16P4-201ENST00000453883 522 ntBASIC20.97■□□□□ 0.95
SOX1O00570 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SOX1O00570 CA15P1-201ENST00000481698 905 ntBASIC20.97■□□□□ 0.95
SOX1O00570 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.97■□□□□ 0.95
SOX1O00570 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.97■□□□□ 0.95
SOX1O00570 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.97■□□□□ 0.95
SOX1O00570 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.97■□□□□ 0.95
SOX1O00570 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.97■□□□□ 0.95
SOX1O00570 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.97■□□□□ 0.95
SOX1O00570 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.97■□□□□ 0.95
SOX1O00570 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SOX1O00570 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.97■□□□□ 0.95
SOX1O00570 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SOX1O00570 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SOX1O00570 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SOX1O00570 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.97■□□□□ 0.95
SOX1O00570 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SOX1O00570 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.96■□□□□ 0.95
SOX1O00570 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.96■□□□□ 0.95
SOX1O00570 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SOX1O00570 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.96■□□□□ 0.95
SOX1O00570 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SOX1O00570 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SOX1O00570 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SOX1O00570 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SOX1O00570 Z85996.1-201ENST00000494644 937 ntBASIC20.96■□□□□ 0.95
SOX1O00570 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.96■□□□□ 0.95
SOX1O00570 POLD2P1-201ENST00000511220 997 ntBASIC20.96■□□□□ 0.95
SOX1O00570 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.96■□□□□ 0.95
SOX1O00570 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.96■□□□□ 0.95
SOX1O00570 NEK4P2-201ENST00000580004 1012 ntBASIC20.96■□□□□ 0.95
SOX1O00570 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.96■□□□□ 0.95
SOX1O00570 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SOX1O00570 LINC01711-201ENST00000598340 967 ntBASIC20.96■□□□□ 0.95
SOX1O00570 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.96■□□□□ 0.95
SOX1O00570 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SOX1O00570 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SOX1O00570 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.96■□□□□ 0.95
SOX1O00570 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SOX1O00570 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.96■□□□□ 0.95
SOX1O00570 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.96■□□□□ 0.95
SOX1O00570 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SOX1O00570 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SOX1O00570 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.95
SOX1O00570 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SOX1O00570 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SOX1O00570 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SOX1O00570 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.95■□□□□ 0.94
SOX1O00570 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SOX1O00570 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SOX1O00570 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SOX1O00570 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.95■□□□□ 0.94
SOX1O00570 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SOX1O00570 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.95■□□□□ 0.94
SOX1O00570 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.95■□□□□ 0.94
SOX1O00570 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SOX1O00570 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SOX1O00570 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
SOX1O00570 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SOX1O00570 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SOX1O00570 KRT8P20-201ENST00000423953 1409 ntBASIC20.95■□□□□ 0.94
SOX1O00570 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SOX1O00570 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms