Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.95■■□□□ 1.27
TMEM88BA6NKF7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.95■■□□□ 1.26
TMEM88BA6NKF7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TMEM88BA6NKF7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC22.95■■□□□ 1.26
TMEM88BA6NKF7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
TMEM88BA6NKF7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC22.95■■□□□ 1.26
TMEM88BA6NKF7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC22.95■■□□□ 1.26
TMEM88BA6NKF7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
TMEM88BA6NKF7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
TMEM88BA6NKF7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC22.95■■□□□ 1.26
TMEM88BA6NKF7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TMEM88BA6NKF7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TMEM88BA6NKF7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.94■■□□□ 1.26
TMEM88BA6NKF7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TMEM88BA6NKF7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TMEM88BA6NKF7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TMEM88BA6NKF7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC22.94■■□□□ 1.26
TMEM88BA6NKF7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC22.94■■□□□ 1.26
TMEM88BA6NKF7 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC22.94■■□□□ 1.26
TMEM88BA6NKF7 AP002469.2-201ENST00000531724 424 ntBASIC22.94■■□□□ 1.26
TMEM88BA6NKF7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC22.94■■□□□ 1.26
TMEM88BA6NKF7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC22.94■■□□□ 1.26
TMEM88BA6NKF7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.94■■□□□ 1.26
TMEM88BA6NKF7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.93■■□□□ 1.26
TMEM88BA6NKF7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC22.93■■□□□ 1.26
TMEM88BA6NKF7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC22.93■■□□□ 1.26
TMEM88BA6NKF7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TMEM88BA6NKF7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC22.93■■□□□ 1.26
TMEM88BA6NKF7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TMEM88BA6NKF7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TMEM88BA6NKF7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TMEM88BA6NKF7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
TMEM88BA6NKF7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.93■■□□□ 1.26
TMEM88BA6NKF7 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TMEM88BA6NKF7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC22.93■■□□□ 1.26
TMEM88BA6NKF7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TMEM88BA6NKF7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC22.93■■□□□ 1.26
TMEM88BA6NKF7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
TMEM88BA6NKF7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC22.93■■□□□ 1.26
TMEM88BA6NKF7 AC091304.2-201ENST00000564639 760 ntBASIC22.93■■□□□ 1.26
TMEM88BA6NKF7 AP002414.4-201ENST00000589764 1148 ntBASIC22.93■■□□□ 1.26
TMEM88BA6NKF7 LINC01711-201ENST00000598340 967 ntBASIC22.93■■□□□ 1.26
TMEM88BA6NKF7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TMEM88BA6NKF7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TMEM88BA6NKF7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC22.93■■□□□ 1.26
TMEM88BA6NKF7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC22.93■■□□□ 1.26
TMEM88BA6NKF7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC22.92■■□□□ 1.26
TMEM88BA6NKF7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
TMEM88BA6NKF7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
TMEM88BA6NKF7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TMEM88BA6NKF7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TMEM88BA6NKF7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
TMEM88BA6NKF7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.92■■□□□ 1.26
TMEM88BA6NKF7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.92■■□□□ 1.26
TMEM88BA6NKF7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC22.92■■□□□ 1.26
TMEM88BA6NKF7 AC092183.1-201ENST00000469884 875 ntBASIC22.92■■□□□ 1.26
TMEM88BA6NKF7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC22.92■■□□□ 1.26
TMEM88BA6NKF7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC22.92■■□□□ 1.26
TMEM88BA6NKF7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
TMEM88BA6NKF7 AC120114.3-201ENST00000611923 658 ntBASIC22.92■■□□□ 1.26
TMEM88BA6NKF7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
TMEM88BA6NKF7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TMEM88BA6NKF7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
TMEM88BA6NKF7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.92■■□□□ 1.26
TMEM88BA6NKF7 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.91■■□□□ 1.26
TMEM88BA6NKF7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC22.91■■□□□ 1.26
TMEM88BA6NKF7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TMEM88BA6NKF7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.91■■□□□ 1.26
TMEM88BA6NKF7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TMEM88BA6NKF7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
TMEM88BA6NKF7 AL121772.3-201ENST00000610840 674 ntBASIC22.91■■□□□ 1.26
TMEM88BA6NKF7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC22.91■■□□□ 1.26
TMEM88BA6NKF7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC22.91■■□□□ 1.26
TMEM88BA6NKF7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC22.91■■□□□ 1.26
TMEM88BA6NKF7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TMEM88BA6NKF7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.91■■□□□ 1.26
TMEM88BA6NKF7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TMEM88BA6NKF7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.91■■□□□ 1.26
TMEM88BA6NKF7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TMEM88BA6NKF7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
TMEM88BA6NKF7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TMEM88BA6NKF7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TMEM88BA6NKF7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
TMEM88BA6NKF7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
TMEM88BA6NKF7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC22.9■■□□□ 1.26
TMEM88BA6NKF7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC22.9■■□□□ 1.26
TMEM88BA6NKF7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
TMEM88BA6NKF7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TMEM88BA6NKF7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC22.9■■□□□ 1.26
TMEM88BA6NKF7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
TMEM88BA6NKF7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC22.9■■□□□ 1.26
TMEM88BA6NKF7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC22.9■■□□□ 1.26
TMEM88BA6NKF7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC22.9■■□□□ 1.26
TMEM88BA6NKF7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
TMEM88BA6NKF7 BX640515.1-201ENST00000617215 977 ntBASIC22.9■■□□□ 1.26
TMEM88BA6NKF7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
TMEM88BA6NKF7 C1orf229-201ENST00000623686 2258 ntBASIC22.9■■□□□ 1.26
TMEM88BA6NKF7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
TMEM88BA6NKF7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TMEM88BA6NKF7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms