Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.34□□□□□ -1.56
ATG4BQ9Y4P1 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
ATG4BQ9Y4P1 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
ATG4BQ9Y4P1 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.34□□□□□ -1.56
ATG4BQ9Y4P1 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
ATG4BQ9Y4P1 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 AL442128.2-201ENST00000620246 1824 ntBASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 AL121886.1-201ENST00000358609 435 ntBASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 RN7SKP81-201ENST00000365603 331 ntBASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 RNA5SP178-201ENST00000410380 128 ntBASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 AC098592.2-201ENST00000413158 265 ntBASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 RNF10P1-201ENST00000418589 369 ntBASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 AC009506.2-201ENST00000420635 840 ntBASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 AC093155.2-201ENST00000420734 937 ntBASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 OR10T1P-201ENST00000424327 947 ntBASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 AL662874.1-201ENST00000426065 230 ntBASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 TMEM183AP1-205ENST00000432739 290 ntBASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 RPL36AP39-201ENST00000445859 318 ntBASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 RPS23P9-201ENST00000448848 438 ntBASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 AC087672.1-201ENST00000479876 766 ntBASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 RN7SL273P-201ENST00000481561 299 ntBASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 RN7SKP253-201ENST00000516424 309 ntBASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 CYCSP22-201ENST00000517555 339 ntBASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 AC008676.3-201ENST00000521237 435 ntBASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 AC084824.2-201ENST00000548906 345 ntBASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 MIR4311-201ENST00000580794 100 ntBASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 AC025857.2-201ENST00000602711 238 ntBASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 MIR6862-1-201ENST00000613016 70 ntBASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 MIR6862-2-201ENST00000614755 70 ntBASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 AC015712.7-201ENST00000615211 635 ntBASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 MTCO1P1-201ENST00000624263 1081 ntBASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 AC079776.5-201ENST00000641920 211 ntBASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 AL022311.1-201ENST00000623726 19416 ntBASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 HSPD1P7-201ENST00000447985 1686 ntBASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4BQ9Y4P1 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 RNA5SP131-201ENST00000365452 119 ntBASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 MIR323B-201ENST00000385269 82 ntBASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 SDHDP6-201ENST00000414693 480 ntBASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 VN1R31P-201ENST00000417498 730 ntBASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 AC006335.2-201ENST00000437993 330 ntBASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 SUMO2P3-201ENST00000438311 288 ntBASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 NANOGP9-201ENST00000439890 892 ntBASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 AC064862.4-201ENST00000442180 334 ntBASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 AC005297.1-201ENST00000444765 862 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms