Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 MTCO1P14-201ENST00000441695 1559 ntBASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 AKAP3-201ENST00000228850 3339 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 CPA4-201ENST00000222482 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 IL5RA-206ENST00000430514 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 EPB41L5-202ENST00000331393 1777 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 AC107419.1-201ENST00000422048 1879 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 ACTR6-202ENST00000546902 1877 ntTSL 2 BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 PLA2G2C-201ENST00000247992 453 ntAPPRIS P5 TSL 5 BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 IL37-205ENST00000353225 652 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 RN7SKP37-201ENST00000364494 296 ntBASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 ENSA-209ENST00000369016 923 ntTSL 5 BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 NFIB-202ENST00000380924 840 ntTSL 5 BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 MIR16-1-201ENST00000385271 89 ntBASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 AL022332.1-201ENST00000411511 428 ntTSL 5 BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 LINC01363-201ENST00000426709 971 ntTSL 5 BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 RPEP2-201ENST00000432149 701 ntBASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 AC091132.2-201ENST00000433601 769 ntTSL 3 BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 ZDHHC20P1-204ENST00000435787 423 ntBASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 ATP6V1E1P1-201ENST00000439215 681 ntBASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 AC239367.1-201ENST00000439389 936 ntBASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 ASS1P4-201ENST00000439462 1234 ntBASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 AC104332.1-201ENST00000440471 797 ntBASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 MRPS31P2-201ENST00000451581 518 ntBASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 AC096915.1-201ENST00000456185 512 ntBASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 ELOCP24-201ENST00000456370 334 ntBASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 MTCO1P42-201ENST00000457379 726 ntBASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 RN7SL146P-201ENST00000472338 297 ntBASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 DAZAP2P1-201ENST00000475212 503 ntBASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 RN7SL464P-201ENST00000492743 297 ntBASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 RN7SL472P-201ENST00000492799 293 ntBASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 AC104109.1-201ENST00000498563 436 ntBASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 MYL5-205ENST00000505477 584 ntTSL 3 BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 AC060765.1-202ENST00000518367 257 ntTSL 3 BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 AC136424.1-201ENST00000518425 542 ntTSL 4 BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 AC025437.1-201ENST00000523820 346 ntTSL 2 BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 DEFB131D-201ENST00000526803 184 ntBASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 SLC2A13P1-201ENST00000531560 322 ntBASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 AP000757.2-201ENST00000531850 557 ntTSL 5 BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 AC023794.4-201ENST00000551732 754 ntTSL 5 BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 OR4T1P-201ENST00000554933 911 ntBASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 CYCSP2-201ENST00000558168 301 ntBASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 TTN-AS1-218ENST00000586452 828 ntTSL 5 BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 AC020634.1-201ENST00000608701 549 ntBASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 AC087645.3-201ENST00000624708 587 ntBASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 HNRNPA1P54-201ENST00000411857 9714 ntBASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 AC127459.1-201ENST00000563129 2768 ntBASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 LINC01260-201ENST00000415889 1416 ntTSL 5 BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 CHODL-203ENST00000400127 2239 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 AC008985.1-201ENST00000624169 2239 ntBASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 ZNF780A-202ENST00000414720 2396 ntTSL 2 BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 NLRP3P1-201ENST00000622303 1785 ntBASIC8.17□□□□□ -1.1
VPS9D1Q9Y2B5 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
VPS9D1Q9Y2B5 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
VPS9D1Q9Y2B5 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC8.17□□□□□ -1.1
VPS9D1Q9Y2B5 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
VPS9D1Q9Y2B5 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
VPS9D1Q9Y2B5 AC138207.6-201ENST00000579164 1967 ntBASIC8.17□□□□□ -1.1
VPS9D1Q9Y2B5 C1orf87-201ENST00000371201 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
VPS9D1Q9Y2B5 AC078795.1-201ENST00000602342 3143 ntBASIC8.17□□□□□ -1.1
VPS9D1Q9Y2B5 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
VPS9D1Q9Y2B5 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC8.17□□□□□ -1.1
VPS9D1Q9Y2B5 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
VPS9D1Q9Y2B5 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
VPS9D1Q9Y2B5 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC8.17□□□□□ -1.1
VPS9D1Q9Y2B5 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC8.17□□□□□ -1.1
VPS9D1Q9Y2B5 MKNK1-AS1-201ENST00000602433 2445 ntTSL 2 BASIC8.17□□□□□ -1.1
VPS9D1Q9Y2B5 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
VPS9D1Q9Y2B5 GIP-201ENST00000357424 716 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
VPS9D1Q9Y2B5 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
VPS9D1Q9Y2B5 Y_RNA.100-201ENST00000363141 102 ntBASIC8.17□□□□□ -1.1
VPS9D1Q9Y2B5 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC8.17□□□□□ -1.1
VPS9D1Q9Y2B5 CUBN-201ENST00000377823 705 ntTSL 3 BASIC8.17□□□□□ -1.1
VPS9D1Q9Y2B5 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
VPS9D1Q9Y2B5 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
VPS9D1Q9Y2B5 TRIB2-203ENST00000405331 830 ntTSL 2 BASIC8.17□□□□□ -1.1
VPS9D1Q9Y2B5 RNA5SP203-201ENST00000410451 136 ntBASIC8.17□□□□□ -1.1
VPS9D1Q9Y2B5 Y_RNA.615-201ENST00000410769 117 ntBASIC8.17□□□□□ -1.1
VPS9D1Q9Y2B5 OR13D3P-201ENST00000412501 937 ntBASIC8.17□□□□□ -1.1
VPS9D1Q9Y2B5 OR6E1P-201ENST00000414424 923 ntBASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms