Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 TNPO1P2-201ENST00000426249 2665 ntBASIC5.75□□□□□ -1.49
LRFN1Q9P244 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LRFN1Q9P244 AC007159.1-201ENST00000566529 4706 ntBASIC5.75□□□□□ -1.49
LRFN1Q9P244 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.75□□□□□ -1.49
LRFN1Q9P244 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LRFN1Q9P244 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
LRFN1Q9P244 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
LRFN1Q9P244 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
LRFN1Q9P244 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LRFN1Q9P244 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 UGT2B27P-201ENST00000505092 1620 ntBASIC5.74□□□□□ -1.49
LRFN1Q9P244 AL133243.2-201ENST00000610331 1621 ntBASIC5.74□□□□□ -1.49
LRFN1Q9P244 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LRFN1Q9P244 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LRFN1Q9P244 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LRFN1Q9P244 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LRFN1Q9P244 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LRFN1Q9P244 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LRFN1Q9P244 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LRFN1Q9P244 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LRFN1Q9P244 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LRFN1Q9P244 METTL21EP-201ENST00000298105 713 ntBASIC5.74□□□□□ -1.49
LRFN1Q9P244 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 SNORA51.9-201ENST00000384295 124 ntBASIC5.74□□□□□ -1.49
LRFN1Q9P244 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LRFN1Q9P244 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 AC105402.1-201ENST00000413336 545 ntBASIC5.74□□□□□ -1.49
LRFN1Q9P244 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 OR51A6P-201ENST00000418680 1004 ntBASIC5.74□□□□□ -1.49
LRFN1Q9P244 AC130360.1-201ENST00000425489 1117 ntBASIC5.74□□□□□ -1.49
LRFN1Q9P244 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LRFN1Q9P244 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 FO393414.1-201ENST00000428697 1184 ntBASIC5.74□□□□□ -1.49
LRFN1Q9P244 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 OR3D1P-201ENST00000438288 955 ntBASIC5.74□□□□□ -1.49
LRFN1Q9P244 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 RPL21P18-201ENST00000469899 480 ntBASIC5.74□□□□□ -1.49
LRFN1Q9P244 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 AC104109.1-201ENST00000498563 436 ntBASIC5.74□□□□□ -1.49
LRFN1Q9P244 LSM3P4-201ENST00000502948 309 ntBASIC5.74□□□□□ -1.49
LRFN1Q9P244 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 AC090958.1-201ENST00000511122 351 ntBASIC5.74□□□□□ -1.49
LRFN1Q9P244 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 PRMT5P1-201ENST00000514351 598 ntBASIC5.74□□□□□ -1.49
LRFN1Q9P244 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 AC018442.3-201ENST00000523025 183 ntBASIC5.74□□□□□ -1.49
LRFN1Q9P244 AC130365.2-201ENST00000525882 1201 ntBASIC5.74□□□□□ -1.49
LRFN1Q9P244 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LRFN1Q9P244 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LRFN1Q9P244 AL049830.4-201ENST00000555149 351 ntBASIC5.74□□□□□ -1.49
LRFN1Q9P244 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LRFN1Q9P244 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
LRFN1Q9P244 CYCSP38-201ENST00000559840 322 ntBASIC5.74□□□□□ -1.49
LRFN1Q9P244 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 BNIP3P40-201ENST00000596017 556 ntBASIC5.74□□□□□ -1.49
LRFN1Q9P244 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LRFN1Q9P244 RFPL4AP6-201ENST00000616792 846 ntBASIC5.74□□□□□ -1.49
LRFN1Q9P244 AC021422.1-201ENST00000621212 473 ntBASIC5.74□□□□□ -1.49
LRFN1Q9P244 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LRFN1Q9P244 AC096921.2-201ENST00000561507 1916 ntBASIC5.74□□□□□ -1.49
LRFN1Q9P244 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.74□□□□□ -1.49
LRFN1Q9P244 EIF3EP1-201ENST00000433978 1316 ntBASIC5.74□□□□□ -1.49
LRFN1Q9P244 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRFN1Q9P244 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRFN1Q9P244 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRFN1Q9P244 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRFN1Q9P244 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LRFN1Q9P244 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRFN1Q9P244 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.73□□□□□ -1.49
LRFN1Q9P244 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.73□□□□□ -1.49
LRFN1Q9P244 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRFN1Q9P244 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LRFN1Q9P244 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.73□□□□□ -1.49
LRFN1Q9P244 RNU1-49P-201ENST00000363468 159 ntBASIC5.73□□□□□ -1.49
LRFN1Q9P244 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
LRFN1Q9P244 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.73□□□□□ -1.49
LRFN1Q9P244 RNU6-207P-201ENST00000384137 107 ntBASIC5.73□□□□□ -1.49
LRFN1Q9P244 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.73□□□□□ -1.49
LRFN1Q9P244 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.73□□□□□ -1.49
LRFN1Q9P244 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms