Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.15□□□□□ -1.58
VAPAQ9P0L0 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
VAPAQ9P0L0 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
VAPAQ9P0L0 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.15□□□□□ -1.58
VAPAQ9P0L0 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.15□□□□□ -1.58
VAPAQ9P0L0 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
VAPAQ9P0L0 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
VAPAQ9P0L0 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.15□□□□□ -1.58
VAPAQ9P0L0 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
VAPAQ9P0L0 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.15□□□□□ -1.59
VAPAQ9P0L0 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
VAPAQ9P0L0 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VAPAQ9P0L0 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VAPAQ9P0L0 MORN2-202ENST00000409077 465 ntTSL 5 BASIC5.15□□□□□ -1.59
VAPAQ9P0L0 RMRPP5-201ENST00000411156 267 ntBASIC5.15□□□□□ -1.59
VAPAQ9P0L0 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.15□□□□□ -1.59
VAPAQ9P0L0 FTLP19-201ENST00000433300 394 ntBASIC5.15□□□□□ -1.59
VAPAQ9P0L0 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.15□□□□□ -1.59
VAPAQ9P0L0 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.15□□□□□ -1.59
VAPAQ9P0L0 PRPF38AP1-201ENST00000451976 933 ntBASIC5.15□□□□□ -1.59
VAPAQ9P0L0 AP000547.1-201ENST00000454360 617 ntBASIC5.15□□□□□ -1.59
VAPAQ9P0L0 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.15□□□□□ -1.59
VAPAQ9P0L0 SUMO2P4-201ENST00000504193 276 ntBASIC5.15□□□□□ -1.59
VAPAQ9P0L0 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.15□□□□□ -1.59
VAPAQ9P0L0 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.15□□□□□ -1.59
VAPAQ9P0L0 AC006512.2-201ENST00000543250 486 ntBASIC5.15□□□□□ -1.59
VAPAQ9P0L0 AC040958.1-201ENST00000561102 201 ntBASIC5.15□□□□□ -1.59
VAPAQ9P0L0 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.15□□□□□ -1.59
VAPAQ9P0L0 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.15□□□□□ -1.59
VAPAQ9P0L0 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
VAPAQ9P0L0 AL139041.1-201ENST00000605480 610 ntBASIC5.15□□□□□ -1.59
VAPAQ9P0L0 AC008833.1-201ENST00000611633 691 ntBASIC5.15□□□□□ -1.59
VAPAQ9P0L0 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.15□□□□□ -1.59
VAPAQ9P0L0 AC087565.3-203ENST00000641018 837 ntBASIC5.15□□□□□ -1.59
VAPAQ9P0L0 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VAPAQ9P0L0 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
VAPAQ9P0L0 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VAPAQ9P0L0 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VAPAQ9P0L0 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
VAPAQ9P0L0 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.15□□□□□ -1.59
VAPAQ9P0L0 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VAPAQ9P0L0 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
VAPAQ9P0L0 AC011755.1-201ENST00000623763 2049 ntBASIC5.14□□□□□ -1.59
VAPAQ9P0L0 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VAPAQ9P0L0 AL353796.1-201ENST00000561542 3241 ntBASIC5.14□□□□□ -1.59
VAPAQ9P0L0 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VAPAQ9P0L0 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VAPAQ9P0L0 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.14□□□□□ -1.59
VAPAQ9P0L0 ICE2P1-201ENST00000512800 1849 ntBASIC5.14□□□□□ -1.59
VAPAQ9P0L0 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
VAPAQ9P0L0 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.14□□□□□ -1.59
VAPAQ9P0L0 SUGT1P2-201ENST00000379452 992 ntBASIC5.14□□□□□ -1.59
VAPAQ9P0L0 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.14□□□□□ -1.59
VAPAQ9P0L0 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.14□□□□□ -1.59
VAPAQ9P0L0 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.14□□□□□ -1.59
VAPAQ9P0L0 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.14□□□□□ -1.59
VAPAQ9P0L0 AC092106.1-201ENST00000444291 373 ntBASIC5.14□□□□□ -1.59
VAPAQ9P0L0 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
VAPAQ9P0L0 VDAC2P4-201ENST00000452925 711 ntBASIC5.14□□□□□ -1.59
VAPAQ9P0L0 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.14□□□□□ -1.59
VAPAQ9P0L0 RPS12P31-201ENST00000491419 398 ntBASIC5.14□□□□□ -1.59
VAPAQ9P0L0 RPL15P21-201ENST00000495592 567 ntBASIC5.14□□□□□ -1.59
VAPAQ9P0L0 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.14□□□□□ -1.59
VAPAQ9P0L0 AC109464.1-201ENST00000511091 819 ntBASIC5.14□□□□□ -1.59
VAPAQ9P0L0 EIF3KP3-201ENST00000514461 639 ntBASIC5.14□□□□□ -1.59
VAPAQ9P0L0 SNORA70.20-201ENST00000516848 126 ntBASIC5.14□□□□□ -1.59
VAPAQ9P0L0 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.14□□□□□ -1.59
VAPAQ9P0L0 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.14□□□□□ -1.59
VAPAQ9P0L0 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.14□□□□□ -1.59
VAPAQ9P0L0 AC106730.2-201ENST00000566641 540 ntBASIC5.14□□□□□ -1.59
VAPAQ9P0L0 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.14□□□□□ -1.59
VAPAQ9P0L0 PRPF19P1-201ENST00000584766 898 ntBASIC5.14□□□□□ -1.59
VAPAQ9P0L0 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.14□□□□□ -1.59
VAPAQ9P0L0 MIR6806-201ENST00000622141 64 ntBASIC5.14□□□□□ -1.59
VAPAQ9P0L0 AC138965.3-201ENST00000623875 498 ntBASIC5.14□□□□□ -1.59
VAPAQ9P0L0 AP001052.1-201ENST00000626421 99 ntBASIC5.14□□□□□ -1.59
VAPAQ9P0L0 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.14□□□□□ -1.59
VAPAQ9P0L0 AC099654.6-201ENST00000636487 512 ntBASIC5.14□□□□□ -1.59
VAPAQ9P0L0 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.14□□□□□ -1.59
VAPAQ9P0L0 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VAPAQ9P0L0 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VAPAQ9P0L0 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.14□□□□□ -1.59
VAPAQ9P0L0 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
VAPAQ9P0L0 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VAPAQ9P0L0 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VAPAQ9P0L0 NEPNP-201ENST00000404786 1371 ntBASIC5.14□□□□□ -1.59
VAPAQ9P0L0 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.14□□□□□ -1.59
VAPAQ9P0L0 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VAPAQ9P0L0 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VAPAQ9P0L0 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms