Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RPL7AP23-201ENST00000482625 776 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 LINC00888-204ENST00000487386 421 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 RNA5SP318-201ENST00000516352 92 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AC073581.1-201ENST00000519036 575 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 SNRPCP6-201ENST00000528310 210 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AC090115.2-201ENST00000548060 883 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AL049830.4-201ENST00000555149 351 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AL133241.1-201ENST00000556832 487 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 RN7SL270P-201ENST00000579643 281 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 RPS4XP21-201ENST00000603814 750 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AL352984.2-201ENST00000611153 546 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AL158063.1-201ENST00000615349 536 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 U6.42-201ENST00000618440 107 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 RNU6-368P-201ENST00000620928 107 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AL590240.3-201ENST00000621416 943 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 RNU6-538P-201ENST00000622329 107 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AP000577.1-201ENST00000624366 878 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 LRRC37A12P-201ENST00000454917 1801 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AC022034.1-201ENST00000512867 2156 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AC007012.2-201ENST00000623206 1676 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AC007485.2-201ENST00000623493 1667 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 CR381670.1-201ENST00000624291 1693 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 CCDC150P1-201ENST00000537123 2215 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AC004023.1-201ENST00000561473 1744 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 AL359715.3-201ENST00000569267 2123 ntBASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 AL359694.2-201ENST00000567753 1615 ntBASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 RNA5SP512-201ENST00000364550 120 ntBASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 RN7SKP191-201ENST00000364713 306 ntBASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 SNORA70.3-201ENST00000365075 132 ntBASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 NOX1-203ENST00000372964 661 ntTSL 2 BASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 Y_RNA.553-201ENST00000384670 102 ntBASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 RSL24D1P4-201ENST00000400938 484 ntBASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 UBTFL2-201ENST00000411859 1191 ntBASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 RPLP1P10-201ENST00000413972 339 ntBASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 AL713922.1-201ENST00000416477 747 ntBASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 P2RY10P2-201ENST00000416730 913 ntBASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 AL022324.2-201ENST00000434827 780 ntBASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 CYCSP42-201ENST00000450823 238 ntBASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 SULT1D1P-201ENST00000458020 882 ntBASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 RPS3AP49-201ENST00000472161 790 ntBASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 RPL7P16-201ENST00000479738 738 ntBASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 RN7SL267P-201ENST00000485107 261 ntBASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 AC023050.1-201ENST00000498198 304 ntBASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.93□□□□□ -1.46
SEC61A2Q9H9S3 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms