Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 RNA5SP34-201ENST00000516887 130 ntBASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 SEPT10P1-201ENST00000517342 1162 ntBASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 AP000619.2-201ENST00000546014 969 ntBASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 AC125494.2-201ENST00000602431 657 ntBASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 AL139124.1-201ENST00000609123 421 ntBASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 AC010632.3-201ENST00000611377 369 ntBASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 AC025574.2-201ENST00000615621 514 ntBASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 RNA5SP439-201ENST00000617595 124 ntBASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 NLRP3P1-201ENST00000622303 1785 ntBASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
UPF3BQ9BZI7 AC106872.5-201ENST00000508856 1416 ntBASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 AL009179.1-201ENST00000406085 265 ntBASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 RNU4-34P-201ENST00000410431 124 ntBASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 AL354766.1-201ENST00000423396 542 ntBASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 BX119321.1-201ENST00000428912 797 ntBASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 AC073465.2-201ENST00000440938 498 ntBASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 AP000547.1-201ENST00000454360 617 ntBASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 AC231760.1-201ENST00000498002 260 ntBASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 AC044860.2-201ENST00000561005 179 ntBASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 AL589674.2-201ENST00000604304 337 ntBASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 AC016590.3-201ENST00000611171 753 ntBASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 AC037198.3-201ENST00000616754 526 ntBASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
UPF3BQ9BZI7 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 RN7SKP216-201ENST00000411050 312 ntBASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 AC007161.1-204ENST00000423039 460 ntBASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 AC087672.1-201ENST00000479876 766 ntBASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 AC021106.1-201ENST00000509020 1058 ntBASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 RNA5SP362-201ENST00000516048 118 ntBASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 AC079064.1-201ENST00000528365 362 ntBASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 AL390318.1-201ENST00000624564 687 ntBASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 AC003973.3-201ENST00000624863 2822 ntBASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.59□□□□□ -1.35
UPF3BQ9BZI7 AC083899.1-201ENST00000454465 3819 ntBASIC6.59□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms