Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC069234.4-201ENST00000621276 412 ntBASIC5.01□□□□□ -1.61
SSX3Q99909 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSX3Q99909 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.01□□□□□ -1.61
SSX3Q99909 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSX3Q99909 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SSX3Q99909 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.01□□□□□ -1.61
SSX3Q99909 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SSX3Q99909 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSX3Q99909 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
SSX3Q99909 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SSX3Q99909 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SSX3Q99909 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
SSX3Q99909 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SSX3Q99909 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5□□□□□ -1.61
SSX3Q99909 AL121950.1-201ENST00000624993 2077 ntBASIC5□□□□□ -1.61
SSX3Q99909 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SSX3Q99909 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5□□□□□ -1.61
SSX3Q99909 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5□□□□□ -1.61
SSX3Q99909 MIR433-201ENST00000384837 93 ntBASIC5□□□□□ -1.61
SSX3Q99909 VDAC2P1-201ENST00000399358 958 ntBASIC5□□□□□ -1.61
SSX3Q99909 AL445238.1-204ENST00000400311 463 ntBASIC5□□□□□ -1.61
SSX3Q99909 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5□□□□□ -1.61
SSX3Q99909 CYP4F30P-202ENST00000420048 405 ntBASIC5□□□□□ -1.61
SSX3Q99909 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5□□□□□ -1.61
SSX3Q99909 NPM1P22-201ENST00000427761 952 ntBASIC5□□□□□ -1.61
SSX3Q99909 MTCO1P57-201ENST00000432182 261 ntBASIC5□□□□□ -1.61
SSX3Q99909 NDUFA5P1-201ENST00000433858 341 ntBASIC5□□□□□ -1.61
SSX3Q99909 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5□□□□□ -1.61
SSX3Q99909 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5□□□□□ -1.61
SSX3Q99909 AC097463.1-201ENST00000447288 481 ntBASIC5□□□□□ -1.61
SSX3Q99909 AC092967.1-201ENST00000449016 481 ntBASIC5□□□□□ -1.61
SSX3Q99909 AC002553.3-201ENST00000453002 341 ntBASIC5□□□□□ -1.61
SSX3Q99909 MTND3P4-201ENST00000453537 303 ntBASIC5□□□□□ -1.61
SSX3Q99909 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5□□□□□ -1.61
SSX3Q99909 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5□□□□□ -1.61
SSX3Q99909 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5□□□□□ -1.61
SSX3Q99909 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5□□□□□ -1.61
SSX3Q99909 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5□□□□□ -1.61
SSX3Q99909 AL671862.1-201ENST00000515851 349 ntBASIC5□□□□□ -1.61
SSX3Q99909 RNA5SP400-201ENST00000517155 111 ntBASIC5□□□□□ -1.61
SSX3Q99909 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5□□□□□ -1.61
SSX3Q99909 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5□□□□□ -1.61
SSX3Q99909 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5□□□□□ -1.61
SSX3Q99909 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5□□□□□ -1.61
SSX3Q99909 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5□□□□□ -1.61
SSX3Q99909 AP001858.2-201ENST00000536213 601 ntBASIC5□□□□□ -1.61
SSX3Q99909 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5□□□□□ -1.61
SSX3Q99909 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5□□□□□ -1.61
SSX3Q99909 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5□□□□□ -1.61
SSX3Q99909 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5□□□□□ -1.61
SSX3Q99909 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5□□□□□ -1.61
SSX3Q99909 MIR4701-201ENST00000583094 63 ntBASIC5□□□□□ -1.61
SSX3Q99909 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5□□□□□ -1.61
SSX3Q99909 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5□□□□□ -1.61
SSX3Q99909 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5□□□□□ -1.61
SSX3Q99909 AL138895.2-201ENST00000603019 178 ntBASIC5□□□□□ -1.61
SSX3Q99909 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5□□□□□ -1.61
SSX3Q99909 AC092266.1-201ENST00000610958 165 ntBASIC5□□□□□ -1.61
SSX3Q99909 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5□□□□□ -1.61
SSX3Q99909 AL139254.3-201ENST00000641097 674 ntBASIC5□□□□□ -1.61
SSX3Q99909 QRSL1P1-201ENST00000400977 1540 ntBASIC5□□□□□ -1.61
SSX3Q99909 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
SSX3Q99909 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
SSX3Q99909 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5□□□□□ -1.61
SSX3Q99909 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5□□□□□ -1.61
SSX3Q99909 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5□□□□□ -1.61
SSX3Q99909 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SSX3Q99909 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.99□□□□□ -1.61
SSX3Q99909 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC4.99□□□□□ -1.61
SSX3Q99909 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC4.99□□□□□ -1.61
SSX3Q99909 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSX3Q99909 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
SSX3Q99909 AC021242.1-201ENST00000507315 2035 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
SSX3Q99909 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSX3Q99909 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSX3Q99909 AC018717.1-201ENST00000457712 1505 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSX3Q99909 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC4.99□□□□□ -1.61
SSX3Q99909 AC110792.3-201ENST00000595906 1614 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 AC002525.1-201ENST00000624392 1622 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSX3Q99909 RNU1-134P-201ENST00000362935 165 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 SNORA51.9-201ENST00000384295 124 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 SNORD65-201ENST00000391079 73 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.99□□□□□ -1.61
SSX3Q99909 MTND3P20-201ENST00000407663 186 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC4.99□□□□□ -1.61
SSX3Q99909 SNORA11.3-201ENST00000408471 128 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC4.99□□□□□ -1.61
SSX3Q99909 RN7SKP151-201ENST00000410230 316 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SSX3Q99909 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC4.99□□□□□ -1.61
SSX3Q99909 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.99□□□□□ -1.61
SSX3Q99909 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSX3Q99909 RPS27AP6-201ENST00000427962 448 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 AL136231.1-201ENST00000429407 730 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC4.99□□□□□ -1.61
SSX3Q99909 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms