Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.61□□□□□ -1.51
PKP4Q99569 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PKP4Q99569 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.61□□□□□ -1.51
PKP4Q99569 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PKP4Q99569 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.61□□□□□ -1.51
PKP4Q99569 AC009452.1-201ENST00000640823 606 ntBASIC5.61□□□□□ -1.51
PKP4Q99569 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PKP4Q99569 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PKP4Q99569 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PKP4Q99569 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PKP4Q99569 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PKP4Q99569 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PKP4Q99569 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.6□□□□□ -1.51
PKP4Q99569 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
PKP4Q99569 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
PKP4Q99569 OR10AB1P-202ENST00000641219 1686 ntBASIC5.6□□□□□ -1.51
PKP4Q99569 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.6□□□□□ -1.51
PKP4Q99569 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.6□□□□□ -1.51
PKP4Q99569 MTCO1P15-201ENST00000529569 1526 ntBASIC5.6□□□□□ -1.51
PKP4Q99569 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.6□□□□□ -1.51
PKP4Q99569 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PKP4Q99569 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PKP4Q99569 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PKP4Q99569 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PKP4Q99569 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PKP4Q99569 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.6□□□□□ -1.51
PKP4Q99569 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PKP4Q99569 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.6□□□□□ -1.51
PKP4Q99569 AL356806.1-201ENST00000422524 916 ntBASIC5.6□□□□□ -1.51
PKP4Q99569 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.6□□□□□ -1.51
PKP4Q99569 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.6□□□□□ -1.51
PKP4Q99569 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.6□□□□□ -1.51
PKP4Q99569 AP006222.1-205ENST00000450734 457 ntBASIC5.6□□□□□ -1.51
PKP4Q99569 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.6□□□□□ -1.51
PKP4Q99569 AC011476.1-201ENST00000466725 307 ntBASIC5.6□□□□□ -1.51
PKP4Q99569 RPS17P15-201ENST00000475609 349 ntBASIC5.6□□□□□ -1.51
PKP4Q99569 AC093719.1-201ENST00000480427 441 ntBASIC5.6□□□□□ -1.51
PKP4Q99569 RPL32P33-201ENST00000487023 394 ntBASIC5.6□□□□□ -1.51
PKP4Q99569 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.6□□□□□ -1.51
PKP4Q99569 ST13P12-201ENST00000508958 1094 ntBASIC5.6□□□□□ -1.51
PKP4Q99569 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.6□□□□□ -1.51
PKP4Q99569 AC021678.3-201ENST00000517893 476 ntBASIC5.6□□□□□ -1.51
PKP4Q99569 AC020937.1-201ENST00000519677 1013 ntBASIC5.6□□□□□ -1.51
PKP4Q99569 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PKP4Q99569 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.6□□□□□ -1.51
PKP4Q99569 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.6□□□□□ -1.51
PKP4Q99569 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.6□□□□□ -1.51
PKP4Q99569 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.6□□□□□ -1.51
PKP4Q99569 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.6□□□□□ -1.51
PKP4Q99569 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.6□□□□□ -1.51
PKP4Q99569 SNORD39.2-201ENST00000579995 76 ntBASIC5.6□□□□□ -1.51
PKP4Q99569 MIR4260-201ENST00000583107 67 ntBASIC5.6□□□□□ -1.51
PKP4Q99569 BNIP3P39-201ENST00000601077 554 ntBASIC5.6□□□□□ -1.51
PKP4Q99569 AL365181.4-201ENST00000609800 547 ntBASIC5.6□□□□□ -1.51
PKP4Q99569 AC117490.2-201ENST00000610042 594 ntBASIC5.6□□□□□ -1.51
PKP4Q99569 AL096712.1-201ENST00000614561 159 ntBASIC5.6□□□□□ -1.51
PKP4Q99569 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PKP4Q99569 MIR1910-201ENST00000636955 80 ntBASIC5.6□□□□□ -1.51
PKP4Q99569 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.6□□□□□ -1.51
PKP4Q99569 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.6□□□□□ -1.51
PKP4Q99569 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.6□□□□□ -1.51
PKP4Q99569 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
PKP4Q99569 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PKP4Q99569 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.6□□□□□ -1.51
PKP4Q99569 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.6□□□□□ -1.51
PKP4Q99569 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.6□□□□□ -1.51
PKP4Q99569 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PKP4Q99569 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.59□□□□□ -1.51
PKP4Q99569 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PKP4Q99569 AC024341.1-201ENST00000526444 1552 ntBASIC5.59□□□□□ -1.51
PKP4Q99569 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
PKP4Q99569 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
PKP4Q99569 AC093849.1-201ENST00000563631 2209 ntBASIC5.59□□□□□ -1.51
PKP4Q99569 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.51
PKP4Q99569 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PKP4Q99569 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PKP4Q99569 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.59□□□□□ -1.51
PKP4Q99569 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PKP4Q99569 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
PKP4Q99569 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PKP4Q99569 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PKP4Q99569 OR52B3P-201ENST00000314715 928 ntBASIC5.59□□□□□ -1.51
PKP4Q99569 AL159987.1-201ENST00000347911 293 ntBASIC5.59□□□□□ -1.51
PKP4Q99569 OR7E101P-201ENST00000400428 513 ntBASIC5.59□□□□□ -1.51
PKP4Q99569 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.59□□□□□ -1.51
PKP4Q99569 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.59□□□□□ -1.51
PKP4Q99569 NIFKP3-201ENST00000417799 865 ntBASIC5.59□□□□□ -1.51
PKP4Q99569 AK4P4-201ENST00000419465 646 ntBASIC5.59□□□□□ -1.51
PKP4Q99569 VN1R21P-201ENST00000426703 765 ntBASIC5.59□□□□□ -1.51
PKP4Q99569 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.59□□□□□ -1.51
PKP4Q99569 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.59□□□□□ -1.51
PKP4Q99569 HSFY7P-201ENST00000432672 318 ntBASIC5.59□□□□□ -1.51
PKP4Q99569 HSFY8P-201ENST00000437934 318 ntBASIC5.59□□□□□ -1.51
PKP4Q99569 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.59□□□□□ -1.51
PKP4Q99569 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.59□□□□□ -1.51
PKP4Q99569 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.59□□□□□ -1.51
PKP4Q99569 RAB28P3-201ENST00000448325 597 ntBASIC5.59□□□□□ -1.51
PKP4Q99569 RBMY2TP-201ENST00000451162 947 ntBASIC5.59□□□□□ -1.51
PKP4Q99569 HSFY5P-201ENST00000453726 309 ntBASIC5.59□□□□□ -1.51
PKP4Q99569 HMGN1P8-201ENST00000463578 288 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 159.8 ms