Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RPRD1AQ96P16 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RPRD1AQ96P16 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.76□□□□□ -1.49
RPRD1AQ96P16 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RPRD1AQ96P16 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RPRD1AQ96P16 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RPRD1AQ96P16 MT-RNR2-201ENST00000387347 1559 ntBASIC5.76□□□□□ -1.49
RPRD1AQ96P16 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
RPRD1AQ96P16 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RPRD1AQ96P16 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RPRD1AQ96P16 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.75□□□□□ -1.49
RPRD1AQ96P16 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
RPRD1AQ96P16 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
RPRD1AQ96P16 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
RPRD1AQ96P16 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.75□□□□□ -1.49
RPRD1AQ96P16 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RPRD1AQ96P16 MIR551A-201ENST00000385042 96 ntBASIC5.75□□□□□ -1.49
RPRD1AQ96P16 MIR143-201ENST00000385300 106 ntBASIC5.75□□□□□ -1.49
RPRD1AQ96P16 AL050305.1-201ENST00000399993 1230 ntBASIC5.75□□□□□ -1.49
RPRD1AQ96P16 CBX1P3-201ENST00000413296 527 ntBASIC5.75□□□□□ -1.49
RPRD1AQ96P16 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RPRD1AQ96P16 AL121776.1-201ENST00000429337 372 ntBASIC5.75□□□□□ -1.49
RPRD1AQ96P16 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.75□□□□□ -1.49
RPRD1AQ96P16 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.75□□□□□ -1.49
RPRD1AQ96P16 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.75□□□□□ -1.49
RPRD1AQ96P16 ATP5LP5-201ENST00000483050 299 ntBASIC5.75□□□□□ -1.49
RPRD1AQ96P16 AC138409.2-202ENST00000507274 458 ntBASIC5.75□□□□□ -1.49
RPRD1AQ96P16 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.75□□□□□ -1.49
RPRD1AQ96P16 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RPRD1AQ96P16 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.75□□□□□ -1.49
RPRD1AQ96P16 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
RPRD1AQ96P16 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RPRD1AQ96P16 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RPRD1AQ96P16 FAM72A-208ENST00000607379 1139 ntBASIC5.75□□□□□ -1.49
RPRD1AQ96P16 AC093388.1-201ENST00000609166 430 ntBASIC5.75□□□□□ -1.49
RPRD1AQ96P16 AC016252.1-201ENST00000609721 474 ntBASIC5.75□□□□□ -1.49
RPRD1AQ96P16 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.75□□□□□ -1.49
RPRD1AQ96P16 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.75□□□□□ -1.49
RPRD1AQ96P16 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.75□□□□□ -1.49
RPRD1AQ96P16 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RPRD1AQ96P16 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RPRD1AQ96P16 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.75□□□□□ -1.49
RPRD1AQ96P16 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RPRD1AQ96P16 MRRFP1-201ENST00000435941 1675 ntBASIC5.75□□□□□ -1.49
RPRD1AQ96P16 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
RPRD1AQ96P16 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RPRD1AQ96P16 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.75□□□□□ -1.49
RPRD1AQ96P16 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RPRD1AQ96P16 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.74□□□□□ -1.49
RPRD1AQ96P16 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
RPRD1AQ96P16 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.74□□□□□ -1.49
RPRD1AQ96P16 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
RPRD1AQ96P16 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RPRD1AQ96P16 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RPRD1AQ96P16 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
RPRD1AQ96P16 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RPRD1AQ96P16 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RPRD1AQ96P16 AC087516.1-201ENST00000561236 2428 ntBASIC5.74□□□□□ -1.49
RPRD1AQ96P16 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RPRD1AQ96P16 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
RPRD1AQ96P16 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RPRD1AQ96P16 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RPRD1AQ96P16 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
RPRD1AQ96P16 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.74□□□□□ -1.49
RPRD1AQ96P16 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RPRD1AQ96P16 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
RPRD1AQ96P16 U3.25-201ENST00000391209 220 ntBASIC5.74□□□□□ -1.49
RPRD1AQ96P16 OR10T1P-201ENST00000424327 947 ntBASIC5.74□□□□□ -1.49
RPRD1AQ96P16 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.74□□□□□ -1.49
RPRD1AQ96P16 OR6D1P-201ENST00000436165 939 ntBASIC5.74□□□□□ -1.49
RPRD1AQ96P16 AC012075.1-201ENST00000436549 580 ntBASIC5.74□□□□□ -1.49
RPRD1AQ96P16 AC019185.1-201ENST00000442718 389 ntBASIC5.74□□□□□ -1.49
RPRD1AQ96P16 AL596266.1-201ENST00000448132 400 ntBASIC5.74□□□□□ -1.49
RPRD1AQ96P16 NPM1P19-201ENST00000450070 712 ntBASIC5.74□□□□□ -1.49
RPRD1AQ96P16 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.74□□□□□ -1.49
RPRD1AQ96P16 snoU13.29-201ENST00000459370 104 ntBASIC5.74□□□□□ -1.49
RPRD1AQ96P16 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RPRD1AQ96P16 AC090058.1-201ENST00000498788 435 ntBASIC5.74□□□□□ -1.49
RPRD1AQ96P16 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.74□□□□□ -1.49
RPRD1AQ96P16 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.74□□□□□ -1.49
RPRD1AQ96P16 RN7SKP99-201ENST00000517028 307 ntBASIC5.74□□□□□ -1.49
RPRD1AQ96P16 AC015720.2-201ENST00000567709 334 ntBASIC5.74□□□□□ -1.49
RPRD1AQ96P16 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.74□□□□□ -1.49
RPRD1AQ96P16 H3F3BP2-201ENST00000583907 357 ntBASIC5.74□□□□□ -1.49
RPRD1AQ96P16 AC012616.1-201ENST00000600294 197 ntBASIC5.74□□□□□ -1.49
RPRD1AQ96P16 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.74□□□□□ -1.49
RPRD1AQ96P16 OR51C1P-201ENST00000608504 942 ntBASIC5.74□□□□□ -1.49
RPRD1AQ96P16 Z95327.3-201ENST00000610385 572 ntBASIC5.74□□□□□ -1.49
RPRD1AQ96P16 AC132068.1-201ENST00000623805 459 ntBASIC5.74□□□□□ -1.49
RPRD1AQ96P16 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
RPRD1AQ96P16 TCP11X1-202ENST00000622971 1372 ntBASIC5.74□□□□□ -1.49
RPRD1AQ96P16 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RPRD1AQ96P16 HSPD1P7-201ENST00000447985 1686 ntBASIC5.74□□□□□ -1.49
RPRD1AQ96P16 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
RPRD1AQ96P16 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.74□□□□□ -1.49
RPRD1AQ96P16 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
RPRD1AQ96P16 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
RPRD1AQ96P16 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
RPRD1AQ96P16 AL138820.1-201ENST00000617901 5305 ntBASIC5.74□□□□□ -1.49
RPRD1AQ96P16 AC007342.5-201ENST00000571340 2142 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms