Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 AC067959.1-201ENST00000604334 379 ntBASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 MIR4278-201ENST00000636094 69 ntBASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.4□□□□□ -1.38
PTCHD1Q96NR3 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.4□□□□□ -1.39
PTCHD1Q96NR3 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
PTCHD1Q96NR3 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.4□□□□□ -1.39
PTCHD1Q96NR3 AL669831.5-218ENST00000591702 1873 ntBASIC6.4□□□□□ -1.39
PTCHD1Q96NR3 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.4□□□□□ -1.39
PTCHD1Q96NR3 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
PTCHD1Q96NR3 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
PTCHD1Q96NR3 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.4□□□□□ -1.39
PTCHD1Q96NR3 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
PTCHD1Q96NR3 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
PTCHD1Q96NR3 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.39
PTCHD1Q96NR3 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
PTCHD1Q96NR3 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 ZNF806-201ENST00000438300 1774 ntBASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 RNA5SP382-201ENST00000363355 112 ntBASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 RNA5SP474-201ENST00000391234 90 ntBASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 RNU6ATAC25P-201ENST00000408798 117 ntBASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 GLS-204ENST00000409428 816 ntTSL 2 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 RN7SKP271-201ENST00000410528 320 ntBASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 P2RY10P2-201ENST00000416730 913 ntBASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 RPA2P2-201ENST00000419698 796 ntBASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 MTCO2P34-201ENST00000421994 607 ntBASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 AL590128.1-201ENST00000433407 286 ntBASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 CEACAMP5-201ENST00000448037 961 ntBASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 RPL23AP28-201ENST00000448062 470 ntBASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 PGBD4P1-201ENST00000473644 407 ntBASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 GAPDHP36-201ENST00000480688 918 ntBASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 AC026782.2-201ENST00000510845 636 ntBASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 AC108120.2-201ENST00000512973 294 ntBASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 CHEK2P2-201ENST00000554701 672 ntBASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 RBM22P12-201ENST00000567098 1255 ntBASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 AC079171.1-201ENST00000568788 914 ntBASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 EIF1P4-201ENST00000572664 335 ntBASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 CTSLP2-201ENST00000580501 394 ntBASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 AL590032.1-201ENST00000604920 252 ntBASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 U6atac.1-201ENST00000616025 117 ntBASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 AC121761.2-201ENST00000617300 689 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms