Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC42Q96M95 RPS12P31-201ENST00000491419 398 ntBASIC5.84□□□□□ -1.47
CCDC42Q96M95 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC42Q96M95 AC122718.2-201ENST00000505325 591 ntBASIC5.84□□□□□ -1.47
CCDC42Q96M95 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.84□□□□□ -1.47
CCDC42Q96M95 EIF3KP3-201ENST00000514461 639 ntBASIC5.84□□□□□ -1.47
CCDC42Q96M95 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.84□□□□□ -1.47
CCDC42Q96M95 FTH1P11-201ENST00000517577 551 ntBASIC5.84□□□□□ -1.47
CCDC42Q96M95 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC42Q96M95 AC068305.2-201ENST00000550567 1205 ntBASIC5.84□□□□□ -1.47
CCDC42Q96M95 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC42Q96M95 AC106730.2-201ENST00000566641 540 ntBASIC5.84□□□□□ -1.47
CCDC42Q96M95 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC42Q96M95 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC5.84□□□□□ -1.47
CCDC42Q96M95 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC42Q96M95 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC42Q96M95 AC008833.1-201ENST00000611633 691 ntBASIC5.84□□□□□ -1.47
CCDC42Q96M95 AC138965.3-201ENST00000623875 498 ntBASIC5.84□□□□□ -1.47
CCDC42Q96M95 AC099654.6-201ENST00000636487 512 ntBASIC5.84□□□□□ -1.47
CCDC42Q96M95 MUC2-202ENST00000613187 4845 ntBASIC5.84□□□□□ -1.47
CCDC42Q96M95 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CCDC42Q96M95 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC42Q96M95 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC42Q96M95 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CCDC42Q96M95 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
CCDC42Q96M95 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
CCDC42Q96M95 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CCDC42Q96M95 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CCDC42Q96M95 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
CCDC42Q96M95 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CCDC42Q96M95 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
CCDC42Q96M95 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC42Q96M95 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC42Q96M95 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC42Q96M95 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC42Q96M95 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC42Q96M95 AC022417.1-201ENST00000624768 1303 ntBASIC5.83□□□□□ -1.48
CCDC42Q96M95 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC42Q96M95 AL450345.1-202ENST00000605741 3881 ntBASIC5.83□□□□□ -1.48
CCDC42Q96M95 AC011755.1-201ENST00000623763 2049 ntBASIC5.83□□□□□ -1.48
CCDC42Q96M95 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC42Q96M95 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CCDC42Q96M95 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC42Q96M95 AC007618.1-201ENST00000366455 732 ntBASIC5.83□□□□□ -1.48
CCDC42Q96M95 AC004386.1-201ENST00000393214 761 ntBASIC5.83□□□□□ -1.48
CCDC42Q96M95 COX5BP7-201ENST00000414780 274 ntBASIC5.83□□□□□ -1.48
CCDC42Q96M95 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC42Q96M95 AC113412.1-201ENST00000425840 504 ntBASIC5.83□□□□□ -1.48
CCDC42Q96M95 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC42Q96M95 BX119321.1-201ENST00000428912 797 ntBASIC5.83□□□□□ -1.48
CCDC42Q96M95 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC42Q96M95 AC090018.1-201ENST00000434369 367 ntBASIC5.83□□□□□ -1.48
CCDC42Q96M95 SUMO2P8-201ENST00000434672 286 ntBASIC5.83□□□□□ -1.48
CCDC42Q96M95 AC092106.1-201ENST00000444291 373 ntBASIC5.83□□□□□ -1.48
CCDC42Q96M95 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC42Q96M95 GAPDHP14-201ENST00000450472 937 ntBASIC5.83□□□□□ -1.48
CCDC42Q96M95 AL359839.1-201ENST00000451975 1160 ntBASIC5.83□□□□□ -1.48
CCDC42Q96M95 PRPF38AP1-201ENST00000451976 933 ntBASIC5.83□□□□□ -1.48
CCDC42Q96M95 AC118758.1-202ENST00000454719 225 ntBASIC5.83□□□□□ -1.48
CCDC42Q96M95 RPS24P16-201ENST00000497294 392 ntBASIC5.83□□□□□ -1.48
CCDC42Q96M95 RNU6-615P-201ENST00000516065 106 ntBASIC5.83□□□□□ -1.48
CCDC42Q96M95 AC027369.5-201ENST00000533838 755 ntBASIC5.83□□□□□ -1.48
CCDC42Q96M95 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC42Q96M95 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC42Q96M95 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC42Q96M95 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC42Q96M95 AC009852.2-201ENST00000567898 485 ntBASIC5.83□□□□□ -1.48
CCDC42Q96M95 AC092121.1-201ENST00000569452 202 ntBASIC5.83□□□□□ -1.48
CCDC42Q96M95 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC42Q96M95 AC127024.5-201ENST00000580085 462 ntBASIC5.83□□□□□ -1.48
CCDC42Q96M95 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC42Q96M95 PRPF19P1-201ENST00000584766 898 ntBASIC5.83□□□□□ -1.48
CCDC42Q96M95 AC241377.1-201ENST00000619797 406 ntBASIC5.83□□□□□ -1.48
CCDC42Q96M95 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC42Q96M95 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC42Q96M95 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC42Q96M95 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC42Q96M95 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CCDC42Q96M95 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CCDC42Q96M95 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC42Q96M95 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC42Q96M95 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC42Q96M95 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC42Q96M95 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.82□□□□□ -1.48
CCDC42Q96M95 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC42Q96M95 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC42Q96M95 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.82□□□□□ -1.48
CCDC42Q96M95 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC42Q96M95 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CCDC42Q96M95 MIR375-201ENST00000362103 64 ntBASIC5.82□□□□□ -1.48
CCDC42Q96M95 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC42Q96M95 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CCDC42Q96M95 AC245060.4-201ENST00000413293 1121 ntBASIC5.82□□□□□ -1.48
CCDC42Q96M95 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.82□□□□□ -1.48
CCDC42Q96M95 AC069154.1-201ENST00000432914 542 ntBASIC5.82□□□□□ -1.48
CCDC42Q96M95 OR6D1P-201ENST00000436165 939 ntBASIC5.82□□□□□ -1.48
CCDC42Q96M95 AC005297.1-201ENST00000444765 862 ntBASIC5.82□□□□□ -1.48
CCDC42Q96M95 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.82□□□□□ -1.48
CCDC42Q96M95 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC42Q96M95 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms