Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC245884.2-201ENST00000426257 404 ntBASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AL606490.7-201ENST00000433136 191 ntBASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AC245517.2-201ENST00000442890 346 ntBASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AL358794.1-201ENST00000445689 381 ntBASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 RPL7P55-201ENST00000450522 746 ntBASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AC090589.1-201ENST00000473109 362 ntBASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 RN7SL413P-201ENST00000482700 297 ntBASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 HMGB1P3-201ENST00000502802 616 ntBASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AC067904.2-201ENST00000517322 1283 ntBASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AC004923.2-201ENST00000529649 369 ntBASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AC084121.1-201ENST00000533882 835 ntBASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AC007834.2-201ENST00000536310 343 ntBASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 RPL3P13-201ENST00000550415 216 ntBASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AC010547.7-201ENST00000570323 333 ntBASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 SYPL1P2-201ENST00000582878 727 ntBASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 WBP1LP12-201ENST00000604449 331 ntBASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AC008115.4-201ENST00000619780 775 ntBASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 AL929601.4-201ENST00000613011 1341 ntBASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 RNA5SP77-201ENST00000365394 120 ntBASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 ATP5F1P2-201ENST00000398143 760 ntBASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 AC112492.1-201ENST00000449607 712 ntBASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 RPL12P31-201ENST00000478433 450 ntBASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 AC004263.1-201ENST00000479327 332 ntBASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 AC116562.1-201ENST00000485355 781 ntBASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 OR4D12P-201ENST00000509361 911 ntBASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 HPRT1P1-201ENST00000509498 657 ntBASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 AC010343.2-201ENST00000510162 224 ntBASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 ODF1-202ENST00000518835 368 ntTSL 3 BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 AC023968.1-201ENST00000560719 475 ntBASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 DHFRP1-201ENST00000579682 559 ntBASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 AC005224.3-201ENST00000584683 2140 ntBASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 AC005034.4-201ENST00000603612 899 ntBASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 QTRT1P1-201ENST00000604344 1078 ntBASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 AC099785.1-201ENST00000605697 437 ntBASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 AC093673.2-201ENST00000609674 331 ntBASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 AC122108.2-201ENST00000611946 526 ntBASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 AC068213.1-201ENST00000625124 226 ntBASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms