Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RPL10P10-201ENST00000403509 664 ntBASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 AL355143.1-201ENST00000407101 841 ntBASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 HMGN1P20-201ENST00000411849 300 ntBASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 AC073410.1-201ENST00000435125 589 ntBASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 PCBP2P1-201ENST00000437262 977 ntBASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 AC092902.1-201ENST00000486999 259 ntBASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 RN7SL193P-201ENST00000491708 276 ntBASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 LSM3P4-201ENST00000502948 309 ntBASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 IGLV3-30-201ENST00000524362 298 ntBASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 AP003102.1-201ENST00000525638 661 ntBASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 AP000619.2-201ENST00000546014 969 ntBASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 AC007346.2-201ENST00000564816 892 ntBASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 AC233266.2-201ENST00000567067 528 ntBASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 AC092121.1-201ENST00000569452 202 ntBASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 MIR4420-201ENST00000583944 77 ntBASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 AC005242.1-201ENST00000585658 438 ntBASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 AC108865.2-201ENST00000606881 432 ntBASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 AP005431.1-201ENST00000618479 319 ntBASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 AC019080.5-201ENST00000624891 757 ntBASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 AC129915.3-201ENST00000634128 948 ntBASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 AC008691.1-209ENST00000642094 814 ntBASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
CHMP4CQ96CF2 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC7.09□□□□□ -1.28
CHMP4CQ96CF2 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
CHMP4CQ96CF2 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 AC016745.2-201ENST00000608834 3443 ntBASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 MAPK10-338ENST00000641647 3362 ntBASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 OR10R3P-201ENST00000361688 942 ntBASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 RNU6-650P-201ENST00000365658 111 ntBASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 GCNT6-201ENST00000379591 934 ntBASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 BX679664.2-201ENST00000439282 283 ntBASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 RNF2P1-201ENST00000442955 1010 ntBASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 AC016027.4-201ENST00000450866 277 ntBASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 AC079080.1-201ENST00000479841 822 ntBASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 AC093719.1-201ENST00000480427 441 ntBASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 RNU6-1102P-201ENST00000516149 96 ntBASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 AC103833.1-201ENST00000517442 172 ntBASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 CASP5-209ENST00000531367 879 ntTSL 5 BASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 AC244502.2-201ENST00000543361 851 ntBASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 AC007956.1-201ENST00000555623 542 ntBASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 NPM1P42-201ENST00000560329 862 ntBASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 AC027243.2-201ENST00000602530 724 ntBASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 MTATP6P2-201ENST00000603319 678 ntBASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 BNIP3P31-201ENST00000604515 566 ntBASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 AL391834.1-201ENST00000609609 560 ntBASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 AL163051.2-201ENST00000618976 735 ntBASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 AC026124.2-201ENST00000621847 656 ntBASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 AL357562.1-201ENST00000624911 609 ntBASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 AL355480.1-201ENST00000629041 99 ntBASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 AC004656.1-201ENST00000568479 4951 ntBASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms