Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 CASC19-260ENST00000641828 2001 ntBASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ATG4AQ8WYN0 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 SEPT7P7-201ENST00000420492 1301 ntBASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 AL158152.1-201ENST00000602652 1435 ntBASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 PARP4P2-201ENST00000446672 3326 ntBASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 MIR130B-202ENST00000385018 82 ntBASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 RN7SKP279-201ENST00000411383 298 ntBASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 AL354890.1-201ENST00000413730 346 ntBASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 Z82198.3-201ENST00000421145 199 ntBASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 AL139158.1-201ENST00000424719 340 ntBASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 CLNS1AP1-201ENST00000435954 682 ntBASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 AC023141.8-201ENST00000442554 208 ntBASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 AC104629.2-201ENST00000468627 598 ntBASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 AC104982.1-201ENST00000478775 574 ntBASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 RN7SL362P-201ENST00000494228 267 ntBASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 AC121161.1-201ENST00000510606 652 ntBASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 AC067904.2-201ENST00000517322 1283 ntBASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 AC034205.1-201ENST00000520621 638 ntBASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 NOP56P3-201ENST00000549457 385 ntBASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 AL163952.1-202ENST00000569625 600 ntBASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 PCA3_2.1-201ENST00000612507 409 ntBASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 uc_338.31-201ENST00000615595 186 ntBASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 AC096708.4-201ENST00000620563 552 ntBASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.02□□□□□ -1.45
ATG4AQ8WYN0 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 ANAPC10P1-201ENST00000395991 556 ntBASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 AF228730.1-201ENST00000397972 663 ntBASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 GCNT1P4-201ENST00000404096 329 ntBASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 RNU4-27P-201ENST00000410889 139 ntBASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 SSR1P2-201ENST00000415208 787 ntBASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 FAM183DP-201ENST00000421987 399 ntBASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 AC245517.2-201ENST00000442890 346 ntBASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 AL096829.2-201ENST00000446582 742 ntBASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 RAB28P3-201ENST00000448325 597 ntBASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 RPS23P9-201ENST00000448848 438 ntBASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 CEACAMP11-201ENST00000455211 583 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms