Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 AC012616.1-201ENST00000600294 197 ntBASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 IMMP1LP3-201ENST00000604197 224 ntBASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 AC005618.4-201ENST00000625053 554 ntBASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 CYP4F35P-202ENST00000636121 390 ntBASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 AC015799.1-201ENST00000622996 3122 ntBASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 MIR223-201ENST00000385204 110 ntBASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 OR4K12P-201ENST00000406538 961 ntBASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 AL596448.1-201ENST00000415024 392 ntBASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 RPL23AP27-201ENST00000415161 451 ntBASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 AL354868.1-201ENST00000417077 482 ntBASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 RPS11P7-201ENST00000442125 465 ntBASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 CYCSP51-201ENST00000443545 318 ntBASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 DNAJB5P1-201ENST00000454004 806 ntBASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 RPL35AP28-201ENST00000459730 331 ntBASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 AC005532.2-201ENST00000467154 373 ntBASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 RPL15P21-201ENST00000495592 567 ntBASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 RN7SKP66-201ENST00000516681 231 ntBASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 OR4A43P-201ENST00000532938 908 ntBASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SHROOM3Q8TF72 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.63□□□□□ -1.51
SHROOM3Q8TF72 AC016745.2-201ENST00000608834 3443 ntBASIC5.63□□□□□ -1.51
SHROOM3Q8TF72 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.63□□□□□ -1.51
SHROOM3Q8TF72 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHROOM3Q8TF72 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHROOM3Q8TF72 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHROOM3Q8TF72 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHROOM3Q8TF72 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHROOM3Q8TF72 RPL7P58-201ENST00000402913 758 ntBASIC5.63□□□□□ -1.51
SHROOM3Q8TF72 TNPO1P1-201ENST00000423641 1138 ntBASIC5.63□□□□□ -1.51
SHROOM3Q8TF72 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.63□□□□□ -1.51
SHROOM3Q8TF72 RPEP1-201ENST00000504507 658 ntBASIC5.63□□□□□ -1.51
SHROOM3Q8TF72 AC074255.1-201ENST00000511259 501 ntBASIC5.63□□□□□ -1.51
SHROOM3Q8TF72 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.63□□□□□ -1.51
SHROOM3Q8TF72 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.63□□□□□ -1.51
SHROOM3Q8TF72 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.63□□□□□ -1.51
SHROOM3Q8TF72 MIR4480-201ENST00000582492 71 ntBASIC5.63□□□□□ -1.51
SHROOM3Q8TF72 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.63□□□□□ -1.51
SHROOM3Q8TF72 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.63□□□□□ -1.51
SHROOM3Q8TF72 AL445528.2-201ENST00000620582 470 ntBASIC5.63□□□□□ -1.51
SHROOM3Q8TF72 AC007683.2-201ENST00000624681 714 ntBASIC5.63□□□□□ -1.51
SHROOM3Q8TF72 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.63□□□□□ -1.51
SHROOM3Q8TF72 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHROOM3Q8TF72 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SHROOM3Q8TF72 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHROOM3Q8TF72 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHROOM3Q8TF72 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHROOM3Q8TF72 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SHROOM3Q8TF72 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC5.63□□□□□ -1.51
SHROOM3Q8TF72 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 AL034546.1-201ENST00000623740 3693 ntBASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 DBIP1-201ENST00000401435 260 ntBASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 LDHAP2-201ENST00000437325 985 ntBASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 AL450996.1-201ENST00000445574 1202 ntBASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 RPS26P41-201ENST00000450370 284 ntBASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 AC115223.1-201ENST00000466377 870 ntBASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 RN7SL30P-201ENST00000488416 306 ntBASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 MIR4646-201ENST00000580775 63 ntBASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 AL138960.1-201ENST00000613838 513 ntBASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 GAPDHP42-201ENST00000406848 981 ntBASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms