Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL078621.3-201ENST00000623707 2042 ntBASIC6.59□□□□□ -1.35
SNED1Q8TER0 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SNED1Q8TER0 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SNED1Q8TER0 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
SNED1Q8TER0 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SNED1Q8TER0 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SNED1Q8TER0 AC092070.2-203ENST00000598377 3644 ntBASIC6.59□□□□□ -1.36
SNED1Q8TER0 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.59□□□□□ -1.36
SNED1Q8TER0 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
SNED1Q8TER0 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
SNED1Q8TER0 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.36
SNED1Q8TER0 RN7SKP113-201ENST00000363891 295 ntBASIC6.59□□□□□ -1.36
SNED1Q8TER0 MIR192-201ENST00000384915 110 ntBASIC6.59□□□□□ -1.36
SNED1Q8TER0 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.59□□□□□ -1.36
SNED1Q8TER0 MGAT2P2-201ENST00000427194 797 ntBASIC6.59□□□□□ -1.36
SNED1Q8TER0 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.59□□□□□ -1.36
SNED1Q8TER0 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.59□□□□□ -1.36
SNED1Q8TER0 DAP3-209ENST00000465375 729 ntTSL 2 BASIC6.59□□□□□ -1.36
SNED1Q8TER0 RN7SL738P-201ENST00000470264 297 ntBASIC6.59□□□□□ -1.36
SNED1Q8TER0 AC006463.2-201ENST00000473326 348 ntBASIC6.59□□□□□ -1.36
SNED1Q8TER0 SCARNA16.4-201ENST00000516956 187 ntBASIC6.59□□□□□ -1.36
SNED1Q8TER0 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.59□□□□□ -1.36
SNED1Q8TER0 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.59□□□□□ -1.36
SNED1Q8TER0 AC137627.1-201ENST00000545761 289 ntBASIC6.59□□□□□ -1.36
SNED1Q8TER0 AP005403.1-201ENST00000579720 229 ntBASIC6.59□□□□□ -1.36
SNED1Q8TER0 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.59□□□□□ -1.36
SNED1Q8TER0 AC068790.7-201ENST00000602347 528 ntBASIC6.59□□□□□ -1.36
SNED1Q8TER0 AL731566.2-201ENST00000618971 317 ntBASIC6.59□□□□□ -1.36
SNED1Q8TER0 AC099494.2-201ENST00000623371 978 ntBASIC6.59□□□□□ -1.36
SNED1Q8TER0 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
SNED1Q8TER0 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SNED1Q8TER0 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
SNED1Q8TER0 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SNED1Q8TER0 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SNED1Q8TER0 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
SNED1Q8TER0 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
SNED1Q8TER0 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.58□□□□□ -1.36
SNED1Q8TER0 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SNED1Q8TER0 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.58□□□□□ -1.36
SNED1Q8TER0 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.58□□□□□ -1.36
SNED1Q8TER0 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.58□□□□□ -1.36
SNED1Q8TER0 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SNED1Q8TER0 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SNED1Q8TER0 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SNED1Q8TER0 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SNED1Q8TER0 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SNED1Q8TER0 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SNED1Q8TER0 U3.3-201ENST00000362986 216 ntBASIC6.58□□□□□ -1.36
SNED1Q8TER0 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SNED1Q8TER0 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SNED1Q8TER0 AC096921.1-201ENST00000411661 375 ntBASIC6.58□□□□□ -1.36
SNED1Q8TER0 AC016397.1-201ENST00000412463 242 ntBASIC6.58□□□□□ -1.36
SNED1Q8TER0 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.58□□□□□ -1.36
SNED1Q8TER0 EIF2S2P3-201ENST00000428356 999 ntBASIC6.58□□□□□ -1.36
SNED1Q8TER0 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.58□□□□□ -1.36
SNED1Q8TER0 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.58□□□□□ -1.36
SNED1Q8TER0 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.58□□□□□ -1.36
SNED1Q8TER0 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SNED1Q8TER0 AC097484.1-201ENST00000471148 389 ntBASIC6.58□□□□□ -1.36
SNED1Q8TER0 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC6.58□□□□□ -1.36
SNED1Q8TER0 AP001804.1-201ENST00000526868 919 ntBASIC6.58□□□□□ -1.36
SNED1Q8TER0 YWHABP2-201ENST00000540201 713 ntBASIC6.58□□□□□ -1.36
SNED1Q8TER0 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
SNED1Q8TER0 AC009117.1-201ENST00000563948 554 ntBASIC6.58□□□□□ -1.36
SNED1Q8TER0 AL133406.3-201ENST00000606817 541 ntBASIC6.58□□□□□ -1.36
SNED1Q8TER0 AL133481.2-203ENST00000607558 139 ntBASIC6.58□□□□□ -1.36
SNED1Q8TER0 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.58□□□□□ -1.36
SNED1Q8TER0 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SNED1Q8TER0 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.57□□□□□ -1.36
SNED1Q8TER0 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SNED1Q8TER0 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SNED1Q8TER0 AL021877.2-201ENST00000624442 10684 ntBASIC6.57□□□□□ -1.36
SNED1Q8TER0 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.57□□□□□ -1.36
SNED1Q8TER0 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
SNED1Q8TER0 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
SNED1Q8TER0 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
SNED1Q8TER0 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.57□□□□□ -1.36
SNED1Q8TER0 AL121886.1-201ENST00000358609 435 ntBASIC6.57□□□□□ -1.36
SNED1Q8TER0 GNG5P2-201ENST00000372054 207 ntBASIC6.57□□□□□ -1.36
SNED1Q8TER0 RNU1-136P-201ENST00000384181 164 ntBASIC6.57□□□□□ -1.36
SNED1Q8TER0 NUDT19P3-201ENST00000404698 555 ntBASIC6.57□□□□□ -1.36
SNED1Q8TER0 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.57□□□□□ -1.36
SNED1Q8TER0 AC010740.1-201ENST00000417035 684 ntBASIC6.57□□□□□ -1.36
SNED1Q8TER0 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SNED1Q8TER0 DDX39BP1-205ENST00000422507 192 ntBASIC6.57□□□□□ -1.36
SNED1Q8TER0 AL138878.2-201ENST00000440581 1241 ntBASIC6.57□□□□□ -1.36
SNED1Q8TER0 AL513533.1-201ENST00000453728 415 ntBASIC6.57□□□□□ -1.36
SNED1Q8TER0 ATP5LP5-201ENST00000483050 299 ntBASIC6.57□□□□□ -1.36
SNED1Q8TER0 AC008897.1-201ENST00000494006 347 ntBASIC6.57□□□□□ -1.36
SNED1Q8TER0 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.57□□□□□ -1.36
SNED1Q8TER0 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.57□□□□□ -1.36
SNED1Q8TER0 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.57□□□□□ -1.36
SNED1Q8TER0 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.57□□□□□ -1.36
SNED1Q8TER0 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.57□□□□□ -1.36
SNED1Q8TER0 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.57□□□□□ -1.36
SNED1Q8TER0 AC068790.4-201ENST00000602474 263 ntBASIC6.57□□□□□ -1.36
SNED1Q8TER0 AP000346.3-201ENST00000622821 210 ntBASIC6.57□□□□□ -1.36
SNED1Q8TER0 MIR7641-1-201ENST00000627518 61 ntBASIC6.57□□□□□ -1.36
SNED1Q8TER0 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.57□□□□□ -1.36
SNED1Q8TER0 AC074101.1-201ENST00000637861 241 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms