Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AL353763.1-201ENST00000624467 1628 ntBASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 RNU6-157P-201ENST00000383957 107 ntBASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 VIM2P-201ENST00000402383 1294 ntBASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 NPM1P4-201ENST00000414095 812 ntBASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 TATDN1P1-201ENST00000414123 891 ntBASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 GAPDHP57-201ENST00000424400 585 ntBASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 ARL6IP1P2-201ENST00000431356 563 ntBASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 RPSAP32-201ENST00000432681 526 ntBASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 AL024509.2-201ENST00000493462 493 ntBASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 AC106822.1-201ENST00000502647 526 ntBASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 MTND2P33-201ENST00000506452 1031 ntBASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 AC093816.1-201ENST00000515076 913 ntBASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 RNU6-319P-201ENST00000516025 108 ntBASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 RN7SKP5-201ENST00000517045 272 ntBASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 SEC11B-201ENST00000518383 499 ntBASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 MED28P5-201ENST00000528254 438 ntBASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 OR8L1P-201ENST00000534005 955 ntBASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 MT1CP-201ENST00000567054 174 ntBASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 AC009237.13-201ENST00000603193 276 ntBASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 AL356321.1-201ENST00000621360 228 ntBASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 AL450226.2-201ENST00000622913 439 ntBASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 AL354702.2-202ENST00000641481 890 ntBASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 AC011592.1-201ENST00000624647 3634 ntBASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 AC004014.2-201ENST00000623718 5122 ntBASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 AC123769.2-201ENST00000624332 5984 ntBASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 AL451064.2-201ENST00000623514 1654 ntBASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 CXADRP1-201ENST00000398098 1095 ntBASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 ERHP2-201ENST00000402323 299 ntBASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 SNORA11.3-201ENST00000408471 128 ntBASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 RN7SKP232-201ENST00000410170 290 ntBASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 ATG4AP1-201ENST00000416893 538 ntBASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 NPM1P24-201ENST00000428039 894 ntBASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 AC092106.2-201ENST00000436597 487 ntBASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 ARMC4P1-201ENST00000438905 707 ntBASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 SNRPBP1-201ENST00000443634 282 ntBASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 TIMM8BP2-201ENST00000445940 251 ntBASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 AL034399.1-201ENST00000451535 380 ntBASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 PDCL3P4-201ENST00000489621 720 ntBASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 RPL37P23-201ENST00000492641 294 ntBASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 RN7SL187P-201ENST00000495587 303 ntBASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 AC096751.1-202ENST00000502691 1067 ntBASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 BNIP3P41-201ENST00000503774 571 ntBASIC7.09□□□□□ -1.27
SHKBP1Q8TBC3 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms