Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLDND2Q8NHS1 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CLDND2Q8NHS1 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLDND2Q8NHS1 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLDND2Q8NHS1 BX284613.1-201ENST00000452221 1641 ntBASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 BMS1P13-201ENST00000417301 885 ntBASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 AL133173.1-201ENST00000423458 397 ntBASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 AC096775.1-201ENST00000437724 448 ntBASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 RPS23P9-201ENST00000448848 438 ntBASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 LDHBP2-201ENST00000456969 1005 ntBASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 AC026348.1-201ENST00000462549 1053 ntBASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 AC006539.1-201ENST00000481419 501 ntBASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 AC073610.1-201ENST00000489971 396 ntBASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 AC105384.2-201ENST00000508433 640 ntBASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 AL163952.1-202ENST00000569625 600 ntBASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 AL133481.2-203ENST00000607558 139 ntBASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 SDR42E1P1-201ENST00000611327 477 ntBASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 AC007204.2-201ENST00000615022 616 ntBASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 AC138965.3-201ENST00000623875 498 ntBASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 AC063952.1-203ENST00000634410 658 ntBASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 AC010266.2-201ENST00000564741 3255 ntBASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLDND2Q8NHS1 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 AL022311.1-201ENST00000623726 19416 ntBASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 OR9K1P-201ENST00000326513 941 ntBASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 GAPDHP24-201ENST00000328713 983 ntBASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 RNA5SP30-201ENST00000365552 115 ntBASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 RPL11P3-201ENST00000395256 523 ntBASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 GAPDHP42-201ENST00000406848 981 ntBASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 AL358178.1-201ENST00000407698 397 ntBASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 RN7SKP279-201ENST00000411383 298 ntBASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 BRWD1P3-201ENST00000428816 390 ntBASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 CFL1P1-202ENST00000432948 411 ntBASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 AP000547.1-201ENST00000454360 617 ntBASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 RPL35AP19-201ENST00000469425 329 ntBASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 AC100832.1-201ENST00000471945 383 ntBASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 RN7SL547P-201ENST00000490793 290 ntBASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 AC008638.1-201ENST00000506035 866 ntBASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 RNA5SP230-201ENST00000517039 122 ntBASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.74□□□□□ -1.65
CLDND2Q8NHS1 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms