Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 RN7SKP6-201ENST00000364795 319 ntBASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 AL133482.1-201ENST00000415988 498 ntBASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 BMS1P17-202ENST00000416720 316 ntBASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 AC073109.1-201ENST00000445066 978 ntBASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 AL450023.1-201ENST00000450868 751 ntBASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 AC138866.2-201ENST00000508650 584 ntBASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 NRBF2P4-201ENST00000520874 850 ntBASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 AP004609.2-201ENST00000532177 190 ntBASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 AC007786.3-201ENST00000615154 596 ntBASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 AC007683.2-201ENST00000624681 714 ntBASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 AC006206.1-201ENST00000544842 3387 ntBASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 ABCC13-202ENST00000463099 3842 ntBASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.14□□□□□ -1.43
CCDC65Q8IXS2 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 RNA5SP122-201ENST00000384457 108 ntBASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 SDHDP6-201ENST00000414693 480 ntBASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 MTND6P12-201ENST00000428247 522 ntBASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 NDUFB4P8-201ENST00000435351 367 ntBASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 FMO7P-201ENST00000436045 768 ntBASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 OR6D1P-201ENST00000436165 939 ntBASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 AC002504.1-201ENST00000438281 691 ntBASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 AC021766.1-201ENST00000624404 741 ntBASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 AL359715.3-201ENST00000569267 2123 ntBASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC65Q8IXS2 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 OR9K1P-202ENST00000641111 3217 ntBASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms