Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC71Q8IV32 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC71Q8IV32 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC71Q8IV32 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC71Q8IV32 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CCDC71Q8IV32 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC71Q8IV32 AC007938.2-201ENST00000604666 2634 ntBASIC5.32□□□□□ -1.56
CCDC71Q8IV32 CR383656.5-201ENST00000547616 1340 ntBASIC5.32□□□□□ -1.56
CCDC71Q8IV32 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CCDC71Q8IV32 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC71Q8IV32 MIR375-201ENST00000362103 64 ntBASIC5.32□□□□□ -1.56
CCDC71Q8IV32 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC71Q8IV32 RNU1-136P-201ENST00000384181 164 ntBASIC5.32□□□□□ -1.56
CCDC71Q8IV32 RN7SKP278-201ENST00000410504 342 ntBASIC5.32□□□□□ -1.56
CCDC71Q8IV32 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC71Q8IV32 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC71Q8IV32 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC71Q8IV32 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC71Q8IV32 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.32□□□□□ -1.56
CCDC71Q8IV32 RPS7P3-201ENST00000443360 580 ntBASIC5.32□□□□□ -1.56
CCDC71Q8IV32 RPS27AP2-201ENST00000457576 465 ntBASIC5.32□□□□□ -1.56
CCDC71Q8IV32 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC71Q8IV32 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.32□□□□□ -1.56
CCDC71Q8IV32 AC021146.10-201ENST00000515628 706 ntBASIC5.32□□□□□ -1.56
CCDC71Q8IV32 SEPT10P1-201ENST00000517342 1162 ntBASIC5.32□□□□□ -1.56
CCDC71Q8IV32 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.32□□□□□ -1.56
CCDC71Q8IV32 AC110056.1-201ENST00000525759 911 ntBASIC5.32□□□□□ -1.56
CCDC71Q8IV32 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC71Q8IV32 AC051619.2-201ENST00000559063 397 ntBASIC5.32□□□□□ -1.56
CCDC71Q8IV32 AL356801.1-201ENST00000559320 294 ntBASIC5.32□□□□□ -1.56
CCDC71Q8IV32 AC007225.2-201ENST00000562529 256 ntBASIC5.32□□□□□ -1.56
CCDC71Q8IV32 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC71Q8IV32 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
CCDC71Q8IV32 MIR4443-201ENST00000585052 53 ntBASIC5.32□□□□□ -1.56
CCDC71Q8IV32 AC006363.1-201ENST00000603806 463 ntBASIC5.32□□□□□ -1.56
CCDC71Q8IV32 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.32□□□□□ -1.56
CCDC71Q8IV32 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC71Q8IV32 AP003400.2-201ENST00000624036 666 ntBASIC5.32□□□□□ -1.56
CCDC71Q8IV32 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC71Q8IV32 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC71Q8IV32 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CCDC71Q8IV32 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC71Q8IV32 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC71Q8IV32 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC71Q8IV32 AC010266.2-201ENST00000564741 3255 ntBASIC5.32□□□□□ -1.56
CCDC71Q8IV32 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC71Q8IV32 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC71Q8IV32 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC71Q8IV32 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC71Q8IV32 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
CCDC71Q8IV32 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC71Q8IV32 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC71Q8IV32 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.31□□□□□ -1.56
CCDC71Q8IV32 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC71Q8IV32 AC104964.3-201ENST00000606115 2860 ntBASIC5.31□□□□□ -1.56
CCDC71Q8IV32 MAPK10-328ENST00000641553 4009 ntBASIC5.31□□□□□ -1.56
CCDC71Q8IV32 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC71Q8IV32 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC71Q8IV32 AC233968.1-201ENST00000611212 1300 ntBASIC5.31□□□□□ -1.56
CCDC71Q8IV32 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC71Q8IV32 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CCDC71Q8IV32 SELENOWP1-201ENST00000322792 252 ntBASIC5.31□□□□□ -1.56
CCDC71Q8IV32 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CCDC71Q8IV32 RN7SKP293-201ENST00000411389 296 ntBASIC5.31□□□□□ -1.56
CCDC71Q8IV32 AC079809.1-201ENST00000415468 276 ntBASIC5.31□□□□□ -1.56
CCDC71Q8IV32 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC71Q8IV32 BX510359.3-201ENST00000422168 306 ntBASIC5.31□□□□□ -1.56
CCDC71Q8IV32 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC71Q8IV32 UBE2V2P1-201ENST00000434717 398 ntBASIC5.31□□□□□ -1.56
CCDC71Q8IV32 RN7SL72P-201ENST00000460697 269 ntBASIC5.31□□□□□ -1.56
CCDC71Q8IV32 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC71Q8IV32 EIF3LP3-201ENST00000495197 822 ntBASIC5.31□□□□□ -1.56
CCDC71Q8IV32 RPS26P24-201ENST00000497656 331 ntBASIC5.31□□□□□ -1.56
CCDC71Q8IV32 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC71Q8IV32 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
CCDC71Q8IV32 ATP5LP3-201ENST00000514223 304 ntBASIC5.31□□□□□ -1.56
CCDC71Q8IV32 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC71Q8IV32 AC022784.5-201ENST00000522241 437 ntBASIC5.31□□□□□ -1.56
CCDC71Q8IV32 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CCDC71Q8IV32 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC71Q8IV32 TRAV11-201ENST00000539512 339 ntBASIC5.31□□□□□ -1.56
CCDC71Q8IV32 AC027216.1-201ENST00000577726 685 ntBASIC5.31□□□□□ -1.56
CCDC71Q8IV32 AC015802.2-201ENST00000589690 189 ntBASIC5.31□□□□□ -1.56
CCDC71Q8IV32 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC71Q8IV32 AC013244.1-201ENST00000604279 193 ntBASIC5.31□□□□□ -1.56
CCDC71Q8IV32 AC079791.1-201ENST00000605356 973 ntBASIC5.31□□□□□ -1.56
CCDC71Q8IV32 AL445670.1-201ENST00000618889 801 ntBASIC5.31□□□□□ -1.56
CCDC71Q8IV32 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CCDC71Q8IV32 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC71Q8IV32 AC133552.1-201ENST00000569988 4007 ntBASIC5.31□□□□□ -1.56
CCDC71Q8IV32 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC71Q8IV32 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CCDC71Q8IV32 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC71Q8IV32 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC71Q8IV32 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CCDC71Q8IV32 MFSD8-219ENST00000641228 2559 ntBASIC5.31□□□□□ -1.56
CCDC71Q8IV32 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC71Q8IV32 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC71Q8IV32 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC71Q8IV32 BCORP1-203ENST00000513194 5093 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms