Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 AC087516.1-201ENST00000561236 2428 ntBASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 AC007114.2-201ENST00000576014 4281 ntBASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 AC234781.2-201ENST00000426370 994 ntBASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 AL121776.1-201ENST00000429337 372 ntBASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 ATP5C1P1-201ENST00000441945 895 ntBASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 GAPDHP62-201ENST00000515313 990 ntBASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 RBM22P12-201ENST00000567098 1255 ntBASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 RN7SL753P-201ENST00000581238 290 ntBASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 AP001357.1-201ENST00000586304 1053 ntBASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 AC012616.1-201ENST00000600294 197 ntBASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 AC092474.3-201ENST00000603022 568 ntBASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 AL359513.1-201ENST00000614364 557 ntBASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 AL354696.1-201ENST00000614652 497 ntBASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 AC007204.2-201ENST00000615022 616 ntBASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 UGT2B24P-201ENST00000514441 1597 ntBASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC5.83□□□□□ -1.48
BHLHA9Q7RTU4 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 AL034546.1-201ENST00000623740 3693 ntBASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 AC232271.1-201ENST00000602455 2715 ntBASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 MIR323A-201ENST00000362199 86 ntBASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 RN7SKP28-201ENST00000364770 305 ntBASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 SNORA16A-201ENST00000384342 137 ntBASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 AL009179.1-201ENST00000406085 265 ntBASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 RPSAP35-201ENST00000413753 818 ntBASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 AL354692.1-201ENST00000423044 315 ntBASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 RN7SL184P-201ENST00000488308 297 ntBASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 AL121594.4-201ENST00000556211 1196 ntBASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 AC040174.2-201ENST00000602701 465 ntBASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 AL022161.1-201ENST00000604390 213 ntBASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 AC140725.3-201ENST00000616193 880 ntBASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 AC132068.1-201ENST00000623805 459 ntBASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 AL109659.3-201ENST00000624985 950 ntBASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.82□□□□□ -1.48
BHLHA9Q7RTU4 AL049767.1-202ENST00000637826 242 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms