Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RAD23BP1-201ENST00000421404 1227 ntBASIC4.25□□□□□ -1.73
VPS13CQ709C8 OR10T1P-201ENST00000424327 947 ntBASIC4.25□□□□□ -1.73
VPS13CQ709C8 AL451062.2-201ENST00000427515 271 ntBASIC4.25□□□□□ -1.73
VPS13CQ709C8 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.25□□□□□ -1.73
VPS13CQ709C8 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS13CQ709C8 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS13CQ709C8 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.25□□□□□ -1.73
VPS13CQ709C8 AC138701.1-201ENST00000524329 714 ntBASIC4.25□□□□□ -1.73
VPS13CQ709C8 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS13CQ709C8 AC122688.1-201ENST00000541494 223 ntBASIC4.25□□□□□ -1.73
VPS13CQ709C8 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS13CQ709C8 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.25□□□□□ -1.73
VPS13CQ709C8 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS13CQ709C8 AC098935.2-201ENST00000604222 466 ntBASIC4.25□□□□□ -1.73
VPS13CQ709C8 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS13CQ709C8 TEK-204ENST00000519097 3836 ntTSL 2 BASIC4.24□□□□□ -1.73
VPS13CQ709C8 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VPS13CQ709C8 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS13CQ709C8 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VPS13CQ709C8 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC4.24□□□□□ -1.73
VPS13CQ709C8 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
VPS13CQ709C8 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS13CQ709C8 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS13CQ709C8 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC4.24□□□□□ -1.73
VPS13CQ709C8 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS13CQ709C8 AC022916.3-201ENST00000592961 742 ntBASIC4.24□□□□□ -1.73
VPS13CQ709C8 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS13CQ709C8 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS13CQ709C8 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
VPS13CQ709C8 PIGN-251ENST00000640876 6045 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
VPS13CQ709C8 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC4.24□□□□□ -1.73
VPS13CQ709C8 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS13CQ709C8 BAZ2A-214ENST00000551812 8600 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS13CQ709C8 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VPS13CQ709C8 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
VPS13CQ709C8 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
VPS13CQ709C8 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
VPS13CQ709C8 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.24□□□□□ -1.73
VPS13CQ709C8 AC116036.1-201ENST00000412199 367 ntBASIC4.24□□□□□ -1.73
VPS13CQ709C8 RPL23AP1-201ENST00000428990 471 ntBASIC4.24□□□□□ -1.73
VPS13CQ709C8 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS13CQ709C8 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VPS13CQ709C8 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VPS13CQ709C8 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS13CQ709C8 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS13CQ709C8 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS13CQ709C8 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
VPS13CQ709C8 MYT1L-202ENST00000399161 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS13CQ709C8 OR51B3P-201ENST00000412287 913 ntBASIC4.24□□□□□ -1.73
VPS13CQ709C8 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS13CQ709C8 AL359073.1-201ENST00000448036 403 ntBASIC4.24□□□□□ -1.73
VPS13CQ709C8 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS13CQ709C8 TCEA1P1-201ENST00000449716 880 ntBASIC4.24□□□□□ -1.73
VPS13CQ709C8 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS13CQ709C8 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VPS13CQ709C8 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VPS13CQ709C8 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VPS13CQ709C8 LCT-201ENST00000264162 6279 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS13CQ709C8 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VPS13CQ709C8 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.23□□□□□ -1.73
VPS13CQ709C8 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS13CQ709C8 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
VPS13CQ709C8 SNORD8-201ENST00000363915 110 ntBASIC4.23□□□□□ -1.73
VPS13CQ709C8 AC073410.1-201ENST00000435125 589 ntBASIC4.23□□□□□ -1.73
VPS13CQ709C8 AP000797.2-201ENST00000475768 606 ntBASIC4.23□□□□□ -1.73
VPS13CQ709C8 ATP5LP5-201ENST00000483050 299 ntBASIC4.23□□□□□ -1.73
VPS13CQ709C8 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.23□□□□□ -1.73
VPS13CQ709C8 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.23□□□□□ -1.73
VPS13CQ709C8 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS13CQ709C8 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.23□□□□□ -1.73
VPS13CQ709C8 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS13CQ709C8 BNIP3P5-201ENST00000562290 498 ntBASIC4.23□□□□□ -1.73
VPS13CQ709C8 AC069366.1-201ENST00000583159 838 ntBASIC4.23□□□□□ -1.73
VPS13CQ709C8 AC245060.6-201ENST00000624350 8420 ntBASIC4.23□□□□□ -1.73
VPS13CQ709C8 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS13CQ709C8 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VPS13CQ709C8 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VPS13CQ709C8 COL25A1-209ENST00000622134 4819 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
VPS13CQ709C8 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS13CQ709C8 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC4.23□□□□□ -1.73
VPS13CQ709C8 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC4.23□□□□□ -1.73
VPS13CQ709C8 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
VPS13CQ709C8 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS13CQ709C8 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS13CQ709C8 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VPS13CQ709C8 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
VPS13CQ709C8 RNA5SP387-201ENST00000364226 106 ntBASIC4.23□□□□□ -1.73
VPS13CQ709C8 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
VPS13CQ709C8 AC004074.1-201ENST00000421810 1063 ntBASIC4.23□□□□□ -1.73
VPS13CQ709C8 AC007064.3-201ENST00000422608 359 ntBASIC4.23□□□□□ -1.73
VPS13CQ709C8 AL365220.1-201ENST00000432923 399 ntBASIC4.23□□□□□ -1.73
VPS13CQ709C8 RPL23AP56-201ENST00000460778 453 ntBASIC4.23□□□□□ -1.73
VPS13CQ709C8 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VPS13CQ709C8 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC4.23□□□□□ -1.73
VPS13CQ709C8 SCARNA22-201ENST00000503991 125 ntBASIC4.23□□□□□ -1.73
VPS13CQ709C8 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS13CQ709C8 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.23□□□□□ -1.73
VPS13CQ709C8 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC4.23□□□□□ -1.73
VPS13CQ709C8 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.23□□□□□ -1.73
VPS13CQ709C8 KRIT1-204ENST00000394507 4762 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms