Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RIF1Q5UIP0 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
RIF1Q5UIP0 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
RIF1Q5UIP0 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RIF1Q5UIP0 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.33□□□□□ -1.56
RIF1Q5UIP0 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RIF1Q5UIP0 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RIF1Q5UIP0 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RIF1Q5UIP0 AC009948.3-201ENST00000603415 1798 ntBASIC5.33□□□□□ -1.56
RIF1Q5UIP0 AL050305.1-201ENST00000399993 1230 ntBASIC5.33□□□□□ -1.56
RIF1Q5UIP0 RN7SKP126-201ENST00000411143 300 ntBASIC5.33□□□□□ -1.56
RIF1Q5UIP0 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.33□□□□□ -1.56
RIF1Q5UIP0 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC5.33□□□□□ -1.56
RIF1Q5UIP0 AC097721.1-201ENST00000427150 1253 ntBASIC5.33□□□□□ -1.56
RIF1Q5UIP0 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.33□□□□□ -1.56
RIF1Q5UIP0 GSTM5P1-201ENST00000434751 660 ntBASIC5.33□□□□□ -1.56
RIF1Q5UIP0 RPL23AP83-201ENST00000434984 473 ntBASIC5.33□□□□□ -1.56
RIF1Q5UIP0 RPL38P3-201ENST00000484463 213 ntBASIC5.33□□□□□ -1.56
RIF1Q5UIP0 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RIF1Q5UIP0 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.33□□□□□ -1.56
RIF1Q5UIP0 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
RIF1Q5UIP0 AC015818.6-201ENST00000584274 634 ntBASIC5.33□□□□□ -1.56
RIF1Q5UIP0 AC074141.1-201ENST00000588129 2995 ntBASIC5.33□□□□□ -1.56
RIF1Q5UIP0 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RIF1Q5UIP0 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RIF1Q5UIP0 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RIF1Q5UIP0 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.33□□□□□ -1.56
RIF1Q5UIP0 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RIF1Q5UIP0 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
RIF1Q5UIP0 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.33□□□□□ -1.56
RIF1Q5UIP0 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.33□□□□□ -1.56
RIF1Q5UIP0 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
RIF1Q5UIP0 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.33□□□□□ -1.56
RIF1Q5UIP0 C8orf37-201ENST00000286688 3334 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RIF1Q5UIP0 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.33□□□□□ -1.56
RIF1Q5UIP0 GJA6P-201ENST00000415117 1042 ntBASIC5.33□□□□□ -1.56
RIF1Q5UIP0 AL359265.2-201ENST00000434367 631 ntBASIC5.33□□□□□ -1.56
RIF1Q5UIP0 AC009127.1-201ENST00000467090 155 ntBASIC5.33□□□□□ -1.56
RIF1Q5UIP0 AL109766.1-201ENST00000555080 552 ntBASIC5.33□□□□□ -1.56
RIF1Q5UIP0 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
RIF1Q5UIP0 AL513548.2-201ENST00000602994 1207 ntBASIC5.33□□□□□ -1.56
RIF1Q5UIP0 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
RIF1Q5UIP0 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
RIF1Q5UIP0 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.33□□□□□ -1.56
RIF1Q5UIP0 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 AC090058.1-201ENST00000498788 435 ntBASIC5.32□□□□□ -1.56
RIF1Q5UIP0 RPS4XP20-201ENST00000505751 772 ntBASIC5.32□□□□□ -1.56
RIF1Q5UIP0 IGHV1-14-201ENST00000523391 241 ntBASIC5.32□□□□□ -1.56
RIF1Q5UIP0 OR4A2P-201ENST00000527276 913 ntBASIC5.32□□□□□ -1.56
RIF1Q5UIP0 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 MFSD8-239ENST00000641590 2479 ntBASIC5.32□□□□□ -1.56
RIF1Q5UIP0 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.32□□□□□ -1.56
RIF1Q5UIP0 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 LDHAP2-201ENST00000437325 985 ntBASIC5.32□□□□□ -1.56
RIF1Q5UIP0 AC015983.1-201ENST00000441577 373 ntBASIC5.32□□□□□ -1.56
RIF1Q5UIP0 AC097484.1-201ENST00000471148 389 ntBASIC5.32□□□□□ -1.56
RIF1Q5UIP0 AC091167.1-201ENST00000492017 396 ntBASIC5.32□□□□□ -1.56
RIF1Q5UIP0 AC074255.1-201ENST00000511259 501 ntBASIC5.32□□□□□ -1.56
RIF1Q5UIP0 AC009643.1-201ENST00000532030 391 ntBASIC5.32□□□□□ -1.56
RIF1Q5UIP0 DPPA3P2-202ENST00000557188 1219 ntBASIC5.32□□□□□ -1.56
RIF1Q5UIP0 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.32□□□□□ -1.56
RIF1Q5UIP0 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 AL355974.3-201ENST00000617383 467 ntBASIC5.32□□□□□ -1.56
RIF1Q5UIP0 AC008785.1-201ENST00000624475 456 ntBASIC5.32□□□□□ -1.56
RIF1Q5UIP0 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms