Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCNA1P78396 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCNA1P78396 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCNA1P78396 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCNA1P78396 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
CCNA1P78396 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.37□□□□□ -1.39
CCNA1P78396 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.36□□□□□ -1.39
CCNA1P78396 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCNA1P78396 MT-RNR2-201ENST00000387347 1559 ntBASIC6.36□□□□□ -1.39
CCNA1P78396 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCNA1P78396 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CCNA1P78396 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CCNA1P78396 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCNA1P78396 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCNA1P78396 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCNA1P78396 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CCNA1P78396 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCNA1P78396 AL589647.1-201ENST00000402485 466 ntBASIC6.36□□□□□ -1.39
CCNA1P78396 RPL37P18-201ENST00000411602 243 ntBASIC6.36□□□□□ -1.39
CCNA1P78396 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.36□□□□□ -1.39
CCNA1P78396 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.36□□□□□ -1.39
CCNA1P78396 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.36□□□□□ -1.39
CCNA1P78396 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.36□□□□□ -1.39
CCNA1P78396 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.36□□□□□ -1.39
CCNA1P78396 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.36□□□□□ -1.39
CCNA1P78396 AC109462.1-201ENST00000491087 368 ntBASIC6.36□□□□□ -1.39
CCNA1P78396 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.36□□□□□ -1.39
CCNA1P78396 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.36□□□□□ -1.39
CCNA1P78396 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.36□□□□□ -1.39
CCNA1P78396 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.36□□□□□ -1.39
CCNA1P78396 AC060766.1-201ENST00000590824 627 ntBASIC6.36□□□□□ -1.39
CCNA1P78396 AP002884.5-201ENST00000595053 1132 ntBASIC6.36□□□□□ -1.39
CCNA1P78396 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.36□□□□□ -1.39
CCNA1P78396 AL049539.1-201ENST00000611964 459 ntBASIC6.36□□□□□ -1.39
CCNA1P78396 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.36□□□□□ -1.39
CCNA1P78396 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCNA1P78396 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCNA1P78396 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
CCNA1P78396 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCNA1P78396 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCNA1P78396 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCNA1P78396 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCNA1P78396 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCNA1P78396 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.36□□□□□ -1.39
CCNA1P78396 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCNA1P78396 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.35□□□□□ -1.39
CCNA1P78396 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCNA1P78396 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCNA1P78396 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCNA1P78396 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.35□□□□□ -1.39
CCNA1P78396 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCNA1P78396 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.35□□□□□ -1.39
CCNA1P78396 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
CCNA1P78396 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
CCNA1P78396 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCNA1P78396 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
CCNA1P78396 HSPA8P18-201ENST00000439846 1928 ntBASIC6.35□□□□□ -1.39
CCNA1P78396 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CCNA1P78396 Z95114.1-201ENST00000624264 14574 ntBASIC6.35□□□□□ -1.39
CCNA1P78396 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.35□□□□□ -1.39
CCNA1P78396 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.35□□□□□ -1.39
CCNA1P78396 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCNA1P78396 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.35□□□□□ -1.39
CCNA1P78396 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.35□□□□□ -1.39
CCNA1P78396 PRUNEP1-201ENST00000425846 705 ntBASIC6.35□□□□□ -1.39
CCNA1P78396 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.35□□□□□ -1.39
CCNA1P78396 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.35□□□□□ -1.39
CCNA1P78396 AL389915.2-201ENST00000454576 441 ntBASIC6.35□□□□□ -1.39
CCNA1P78396 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.35□□□□□ -1.39
CCNA1P78396 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.35□□□□□ -1.39
CCNA1P78396 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.35□□□□□ -1.39
CCNA1P78396 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.35□□□□□ -1.39
CCNA1P78396 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.35□□□□□ -1.39
CCNA1P78396 H3F3BP2-201ENST00000583907 357 ntBASIC6.35□□□□□ -1.39
CCNA1P78396 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.35□□□□□ -1.39
CCNA1P78396 AL139041.1-201ENST00000605480 610 ntBASIC6.35□□□□□ -1.39
CCNA1P78396 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CCNA1P78396 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.35□□□□□ -1.39
CCNA1P78396 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCNA1P78396 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCNA1P78396 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.35□□□□□ -1.39
CCNA1P78396 AC011493.1-201ENST00000596753 1632 ntBASIC6.35□□□□□ -1.39
CCNA1P78396 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCNA1P78396 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
CCNA1P78396 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCNA1P78396 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
CCNA1P78396 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCNA1P78396 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCNA1P78396 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCNA1P78396 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
CCNA1P78396 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCNA1P78396 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.39
CCNA1P78396 AC103591.2-201ENST00000265259 766 ntBASIC6.34□□□□□ -1.39
CCNA1P78396 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCNA1P78396 MIR133B-201ENST00000362210 119 ntBASIC6.34□□□□□ -1.39
CCNA1P78396 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCNA1P78396 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCNA1P78396 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.34□□□□□ -1.39
CCNA1P78396 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.34□□□□□ -1.39
CCNA1P78396 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms