Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RNA5SP271-201ENST00000516700 88 ntBASIC5.34□□□□□ -1.55
CLDN20P56880 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
CLDN20P56880 TRIM51DP-201ENST00000529746 596 ntBASIC5.34□□□□□ -1.55
CLDN20P56880 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.34□□□□□ -1.55
CLDN20P56880 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.34□□□□□ -1.55
CLDN20P56880 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.34□□□□□ -1.55
CLDN20P56880 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.34□□□□□ -1.55
CLDN20P56880 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.34□□□□□ -1.55
CLDN20P56880 AC006530.1-201ENST00000555980 571 ntBASIC5.34□□□□□ -1.55
CLDN20P56880 AC027176.2-201ENST00000559166 746 ntBASIC5.34□□□□□ -1.55
CLDN20P56880 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.34□□□□□ -1.55
CLDN20P56880 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.34□□□□□ -1.55
CLDN20P56880 AC092121.1-201ENST00000569452 202 ntBASIC5.34□□□□□ -1.55
CLDN20P56880 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.34□□□□□ -1.55
CLDN20P56880 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDN20P56880 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN20P56880 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDN20P56880 AL133247.2-201ENST00000603236 482 ntBASIC5.34□□□□□ -1.55
CLDN20P56880 PPATP2-201ENST00000605635 508 ntBASIC5.34□□□□□ -1.55
CLDN20P56880 AP001962.1-201ENST00000624114 559 ntBASIC5.34□□□□□ -1.55
CLDN20P56880 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.34□□□□□ -1.55
CLDN20P56880 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.34□□□□□ -1.55
CLDN20P56880 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CLDN20P56880 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN20P56880 AL034546.1-201ENST00000623740 3693 ntBASIC5.34□□□□□ -1.55
CLDN20P56880 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN20P56880 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CLDN20P56880 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.34□□□□□ -1.56
CLDN20P56880 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CLDN20P56880 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.56
CLDN20P56880 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN20P56880 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN20P56880 AC009962.1-201ENST00000567327 3813 ntBASIC5.33□□□□□ -1.56
CLDN20P56880 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.33□□□□□ -1.56
CLDN20P56880 MAPK10-338ENST00000641647 3362 ntBASIC5.33□□□□□ -1.56
CLDN20P56880 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.33□□□□□ -1.56
CLDN20P56880 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN20P56880 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN20P56880 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN20P56880 RNU1-150P-201ENST00000362491 162 ntBASIC5.33□□□□□ -1.56
CLDN20P56880 RNA5SP211-201ENST00000365516 117 ntBASIC5.33□□□□□ -1.56
CLDN20P56880 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.33□□□□□ -1.56
CLDN20P56880 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.33□□□□□ -1.56
CLDN20P56880 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN20P56880 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CLDN20P56880 AC016739.1-201ENST00000405359 345 ntBASIC5.33□□□□□ -1.56
CLDN20P56880 MIR1203-201ENST00000408812 85 ntBASIC5.33□□□□□ -1.56
CLDN20P56880 MYL6P5-201ENST00000412707 459 ntBASIC5.33□□□□□ -1.56
CLDN20P56880 AL356968.2-201ENST00000412769 1257 ntBASIC5.33□□□□□ -1.56
CLDN20P56880 SLC20A1P1-201ENST00000413906 956 ntBASIC5.33□□□□□ -1.56
CLDN20P56880 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN20P56880 RPS4XP5-201ENST00000419038 768 ntBASIC5.33□□□□□ -1.56
CLDN20P56880 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.33□□□□□ -1.56
CLDN20P56880 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.33□□□□□ -1.56
CLDN20P56880 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN20P56880 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN20P56880 AC073508.1-201ENST00000428866 656 ntBASIC5.33□□□□□ -1.56
CLDN20P56880 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.33□□□□□ -1.56
CLDN20P56880 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN20P56880 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN20P56880 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN20P56880 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.33□□□□□ -1.56
CLDN20P56880 AP002345.1-201ENST00000456493 928 ntBASIC5.33□□□□□ -1.56
CLDN20P56880 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.33□□□□□ -1.56
CLDN20P56880 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.33□□□□□ -1.56
CLDN20P56880 AL122020.1-201ENST00000472287 459 ntBASIC5.33□□□□□ -1.56
CLDN20P56880 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.33□□□□□ -1.56
CLDN20P56880 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.33□□□□□ -1.56
CLDN20P56880 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN20P56880 HMGB1P47-201ENST00000511281 589 ntBASIC5.33□□□□□ -1.56
CLDN20P56880 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN20P56880 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN20P56880 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN20P56880 RNU6-889P-201ENST00000517189 103 ntBASIC5.33□□□□□ -1.56
CLDN20P56880 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.33□□□□□ -1.56
CLDN20P56880 IGKV2-4-201ENST00000523070 340 ntBASIC5.33□□□□□ -1.56
CLDN20P56880 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN20P56880 OR4A43P-201ENST00000532938 908 ntBASIC5.33□□□□□ -1.56
CLDN20P56880 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN20P56880 AC008147.3-201ENST00000548666 354 ntBASIC5.33□□□□□ -1.56
CLDN20P56880 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN20P56880 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN20P56880 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.33□□□□□ -1.56
CLDN20P56880 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.33□□□□□ -1.56
CLDN20P56880 AC092868.3-201ENST00000560515 784 ntBASIC5.33□□□□□ -1.56
CLDN20P56880 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN20P56880 ZNF322P1-201ENST00000568013 1209 ntBASIC5.33□□□□□ -1.56
CLDN20P56880 TXNP4-201ENST00000575018 310 ntBASIC5.33□□□□□ -1.56
CLDN20P56880 AC010503.3-201ENST00000594355 540 ntBASIC5.33□□□□□ -1.56
CLDN20P56880 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.33□□□□□ -1.56
CLDN20P56880 AL355802.4-201ENST00000607635 548 ntBASIC5.33□□□□□ -1.56
CLDN20P56880 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN20P56880 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.33□□□□□ -1.56
CLDN20P56880 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CLDN20P56880 SNX18P12-201ENST00000624821 759 ntBASIC5.33□□□□□ -1.56
CLDN20P56880 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CLDN20P56880 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.33□□□□□ -1.56
CLDN20P56880 AC106858.1-201ENST00000637497 429 ntBASIC5.33□□□□□ -1.56
CLDN20P56880 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN20P56880 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms