Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.39□□□□□ -1.55
CLDN6P56747 BX284613.1-201ENST00000452221 1641 ntBASIC5.39□□□□□ -1.55
CLDN6P56747 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN6P56747 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.39□□□□□ -1.55
CLDN6P56747 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN6P56747 GNG5P2-201ENST00000372054 207 ntBASIC5.39□□□□□ -1.55
CLDN6P56747 MIR130A-201ENST00000385274 89 ntBASIC5.39□□□□□ -1.55
CLDN6P56747 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.39□□□□□ -1.55
CLDN6P56747 AL109941.1-201ENST00000401925 229 ntBASIC5.39□□□□□ -1.55
CLDN6P56747 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.39□□□□□ -1.55
CLDN6P56747 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.39□□□□□ -1.55
CLDN6P56747 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.39□□□□□ -1.55
CLDN6P56747 AC019205.1-201ENST00000421830 730 ntBASIC5.39□□□□□ -1.55
CLDN6P56747 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.39□□□□□ -1.55
CLDN6P56747 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.39□□□□□ -1.55
CLDN6P56747 AL731534.1-201ENST00000434711 269 ntBASIC5.39□□□□□ -1.55
CLDN6P56747 OR6D1P-201ENST00000436165 939 ntBASIC5.39□□□□□ -1.55
CLDN6P56747 AL390879.1-201ENST00000439143 386 ntBASIC5.39□□□□□ -1.55
CLDN6P56747 CEACAMP7-201ENST00000444105 496 ntBASIC5.39□□□□□ -1.55
CLDN6P56747 UBE2V2P4-201ENST00000447495 259 ntBASIC5.39□□□□□ -1.55
CLDN6P56747 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.39□□□□□ -1.55
CLDN6P56747 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.39□□□□□ -1.55
CLDN6P56747 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.39□□□□□ -1.55
CLDN6P56747 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN6P56747 BLZF2P-201ENST00000553776 1130 ntBASIC5.39□□□□□ -1.55
CLDN6P56747 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.39□□□□□ -1.55
CLDN6P56747 MIR4646-201ENST00000580775 63 ntBASIC5.39□□□□□ -1.55
CLDN6P56747 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.39□□□□□ -1.55
CLDN6P56747 AC004890.3-201ENST00000605566 1095 ntBASIC5.39□□□□□ -1.55
CLDN6P56747 AC090607.5-201ENST00000615692 224 ntBASIC5.39□□□□□ -1.55
CLDN6P56747 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.39□□□□□ -1.55
CLDN6P56747 AL353684.1-201ENST00000622677 1120 ntBASIC5.39□□□□□ -1.55
CLDN6P56747 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CLDN6P56747 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN6P56747 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN6P56747 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN6P56747 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.39□□□□□ -1.55
CLDN6P56747 PWAR1-201ENST00000624188 2414 ntBASIC5.39□□□□□ -1.55
CLDN6P56747 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN6P56747 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN6P56747 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.39□□□□□ -1.55
CLDN6P56747 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN6P56747 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN6P56747 AC022164.1-201ENST00000568767 2673 ntBASIC5.38□□□□□ -1.55
CLDN6P56747 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CLDN6P56747 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.38□□□□□ -1.55
CLDN6P56747 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CLDN6P56747 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN6P56747 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.38□□□□□ -1.55
CLDN6P56747 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.38□□□□□ -1.55
CLDN6P56747 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.38□□□□□ -1.55
CLDN6P56747 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.38□□□□□ -1.55
CLDN6P56747 MRPS21P3-201ENST00000436696 262 ntBASIC5.38□□□□□ -1.55
CLDN6P56747 RPL21P133-201ENST00000443666 476 ntBASIC5.38□□□□□ -1.55
CLDN6P56747 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.38□□□□□ -1.55
CLDN6P56747 RN7SL97P-201ENST00000486780 299 ntBASIC5.38□□□□□ -1.55
CLDN6P56747 IGLV3-24-201ENST00000517477 197 ntBASIC5.38□□□□□ -1.55
CLDN6P56747 AC021733.2-201ENST00000518830 497 ntBASIC5.38□□□□□ -1.55
CLDN6P56747 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.38□□□□□ -1.55
CLDN6P56747 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.38□□□□□ -1.55
CLDN6P56747 HNRNPCP1-201ENST00000556181 766 ntBASIC5.38□□□□□ -1.55
CLDN6P56747 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.38□□□□□ -1.55
CLDN6P56747 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.38□□□□□ -1.55
CLDN6P56747 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.38□□□□□ -1.55
CLDN6P56747 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.38□□□□□ -1.55
CLDN6P56747 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.38□□□□□ -1.55
CLDN6P56747 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN6P56747 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN6P56747 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
CLDN6P56747 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CLDN6P56747 AC130304.1-201ENST00000622942 2385 ntBASIC5.38□□□□□ -1.55
CLDN6P56747 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CLDN6P56747 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN6P56747 OFD1P17-201ENST00000437639 3018 ntBASIC5.38□□□□□ -1.55
CLDN6P56747 AC114876.1-201ENST00000490962 1366 ntBASIC5.38□□□□□ -1.55
CLDN6P56747 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN6P56747 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN6P56747 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN6P56747 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN6P56747 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.38□□□□□ -1.55
CLDN6P56747 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN6P56747 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.37□□□□□ -1.55
CLDN6P56747 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN6P56747 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN6P56747 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.37□□□□□ -1.55
CLDN6P56747 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.37□□□□□ -1.55
CLDN6P56747 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN6P56747 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.37□□□□□ -1.55
CLDN6P56747 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN6P56747 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.37□□□□□ -1.55
CLDN6P56747 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN6P56747 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN6P56747 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CLDN6P56747 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.37□□□□□ -1.55
CLDN6P56747 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDN6P56747 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN6P56747 MIR133B-201ENST00000362210 119 ntBASIC5.37□□□□□ -1.55
CLDN6P56747 FABP12P1-201ENST00000401911 322 ntBASIC5.37□□□□□ -1.55
CLDN6P56747 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.37□□□□□ -1.55
CLDN6P56747 RPL26P29-201ENST00000415623 438 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms