Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 RNA5SP77-201ENST00000365394 120 ntBASIC5.72□□□□□ -1.49
SUMO3P55854 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.72□□□□□ -1.49
SUMO3P55854 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SUMO3P55854 MIR433-201ENST00000384837 93 ntBASIC5.72□□□□□ -1.49
SUMO3P55854 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SUMO3P55854 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SUMO3P55854 HMGB3P18-201ENST00000406327 590 ntBASIC5.72□□□□□ -1.49
SUMO3P55854 RNA5SP198-201ENST00000410376 127 ntBASIC5.72□□□□□ -1.49
SUMO3P55854 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.72□□□□□ -1.49
SUMO3P55854 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.72□□□□□ -1.49
SUMO3P55854 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.72□□□□□ -1.49
SUMO3P55854 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.72□□□□□ -1.49
SUMO3P55854 CYCSP11-201ENST00000436426 315 ntBASIC5.72□□□□□ -1.49
SUMO3P55854 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.72□□□□□ -1.49
SUMO3P55854 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.72□□□□□ -1.49
SUMO3P55854 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.72□□□□□ -1.49
SUMO3P55854 CXCR2P1-202ENST00000443392 1074 ntBASIC5.72□□□□□ -1.49
SUMO3P55854 AL592437.1-201ENST00000443781 492 ntBASIC5.72□□□□□ -1.49
SUMO3P55854 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.72□□□□□ -1.49
SUMO3P55854 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.72□□□□□ -1.49
SUMO3P55854 AC103563.5-201ENST00000455643 364 ntBASIC5.72□□□□□ -1.49
SUMO3P55854 RANP2-201ENST00000456833 229 ntBASIC5.72□□□□□ -1.49
SUMO3P55854 AC110749.1-201ENST00000462007 357 ntBASIC5.72□□□□□ -1.49
SUMO3P55854 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.72□□□□□ -1.49
SUMO3P55854 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SUMO3P55854 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.72□□□□□ -1.49
SUMO3P55854 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.72□□□□□ -1.49
SUMO3P55854 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.72□□□□□ -1.49
SUMO3P55854 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.72□□□□□ -1.49
SUMO3P55854 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.72□□□□□ -1.49
SUMO3P55854 OR7E128P-201ENST00000532736 1024 ntBASIC5.72□□□□□ -1.49
SUMO3P55854 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.72□□□□□ -1.49
SUMO3P55854 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.72□□□□□ -1.49
SUMO3P55854 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.72□□□□□ -1.49
SUMO3P55854 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.72□□□□□ -1.49
SUMO3P55854 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SUMO3P55854 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SUMO3P55854 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.72□□□□□ -1.49
SUMO3P55854 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.72□□□□□ -1.49
SUMO3P55854 AC095057.3-201ENST00000567102 1157 ntBASIC5.72□□□□□ -1.49
SUMO3P55854 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.72□□□□□ -1.49
SUMO3P55854 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.72□□□□□ -1.49
SUMO3P55854 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SUMO3P55854 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.72□□□□□ -1.49
SUMO3P55854 AC012368.3-201ENST00000604190 219 ntBASIC5.72□□□□□ -1.49
SUMO3P55854 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.72□□□□□ -1.49
SUMO3P55854 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.72□□□□□ -1.49
SUMO3P55854 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.72□□□□□ -1.49
SUMO3P55854 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.72□□□□□ -1.49
SUMO3P55854 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.72□□□□□ -1.49
SUMO3P55854 MIR6823-201ENST00000622118 61 ntBASIC5.72□□□□□ -1.49
SUMO3P55854 AC138907.10-201ENST00000623708 983 ntBASIC5.72□□□□□ -1.49
SUMO3P55854 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.72□□□□□ -1.49
SUMO3P55854 AC008691.1-209ENST00000642094 814 ntBASIC5.72□□□□□ -1.49
SUMO3P55854 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.72□□□□□ -1.49
SUMO3P55854 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.72□□□□□ -1.49
SUMO3P55854 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.72□□□□□ -1.49
SUMO3P55854 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SUMO3P55854 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
SUMO3P55854 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SUMO3P55854 AC008957.3-201ENST00000624112 2242 ntBASIC5.72□□□□□ -1.49
SUMO3P55854 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
SUMO3P55854 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.72□□□□□ -1.49
SUMO3P55854 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SUMO3P55854 MFSD8-220ENST00000641243 1422 ntBASIC5.72□□□□□ -1.49
SUMO3P55854 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.72□□□□□ -1.49
SUMO3P55854 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
SUMO3P55854 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SUMO3P55854 CCNT2P1-201ENST00000423082 1315 ntBASIC5.72□□□□□ -1.49
SUMO3P55854 KCNMB3P1-202ENST00000493696 3389 ntBASIC5.72□□□□□ -1.49
SUMO3P55854 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.72□□□□□ -1.49
SUMO3P55854 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SUMO3P55854 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SUMO3P55854 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.71□□□□□ -1.49
SUMO3P55854 TEK-204ENST00000519097 3836 ntTSL 2 BASIC5.71□□□□□ -1.49
SUMO3P55854 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.49
SUMO3P55854 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.49
SUMO3P55854 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
SUMO3P55854 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.71□□□□□ -1.49
SUMO3P55854 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SUMO3P55854 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
SUMO3P55854 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SUMO3P55854 ZNF402P-201ENST00000404435 3100 ntBASIC5.71□□□□□ -1.5
SUMO3P55854 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
SUMO3P55854 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SUMO3P55854 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SUMO3P55854 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SUMO3P55854 SHQ1P1-201ENST00000437111 1544 ntBASIC5.71□□□□□ -1.5
SUMO3P55854 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SUMO3P55854 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SUMO3P55854 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SUMO3P55854 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
SUMO3P55854 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SUMO3P55854 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SUMO3P55854 RN7SKP74-201ENST00000362849 309 ntBASIC5.71□□□□□ -1.5
SUMO3P55854 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SUMO3P55854 AL445238.1-204ENST00000400311 463 ntBASIC5.71□□□□□ -1.5
SUMO3P55854 AL021331.1-201ENST00000402817 582 ntBASIC5.71□□□□□ -1.5
SUMO3P55854 RN7SKP121-201ENST00000410842 305 ntBASIC5.71□□□□□ -1.5
SUMO3P55854 RNA5SP115-201ENST00000411160 107 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms